Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4a17
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   108   2e-25
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.6  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.8  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  108 bits (260), Expect = 2e-25
 Identities = 49/91 (53%), Positives = 63/91 (69%)
 Frame = +1

Query: 409 RKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKLVI 588
           + G    +HYTGTLDDGT FDSS  RG P  F +G G+VI+GWD+G+  M  G++ KLV 
Sbjct: 18  KPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVC 77

Query: 589 PPELAYGSAGAPPKIPKSATLTFHVELVKIE 681
            P+ AYGS G P  IP +A LTF VEL+++E
Sbjct: 78  SPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 663 YVKSKSSRLWYLWWCSS*TISQFRWNDK 580
           YV ++ S LW LW  S   I++  W  K
Sbjct: 112 YVVNEFSWLWLLWLLSQTWITRHLWMAK 139


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 610 NHKPIPVE*QVYVVLLRTFQVALDPNP 530
           +HKP P+E +    + + F + L+ NP
Sbjct: 56  SHKPNPLEQKTNAHIEKIFLITLNKNP 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,712
Number of Sequences: 2352
Number of extensions: 12369
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)