Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4a13
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 58 4e-19
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 39 0.004
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 0.63
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.63
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.63
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.63
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 4.5
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 5.9
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.9
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 5.9
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 7.8
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 136 bits (328), Expect = 2e-32
Identities = 85/229 (37%), Positives = 126/229 (55%)
Frame = +3
Query: 36 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 215
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 216 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 395
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 396 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLI 575
+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++
Sbjct: 104 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIV 163
Query: 576 NVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNKKEGK 722
NV RWF TV +QP V V+G ++L ++ ++ K+ EL+ K K
Sbjct: 164 NVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELSAKVAKSAPK 212
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 116 bits (280), Expect = 1e-26
Identities = 61/164 (37%), Positives = 96/164 (58%)
Frame = +3
Query: 231 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 410
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 411 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRW 590
K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++NV RW
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRW 143
Query: 591 FLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNKKEGK 722
F TV +QP V V+G ++L ++ ++ K+ EL+ K K
Sbjct: 144 FRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELSAKVAKSAPK 187
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 58.4 bits (135), Expect(2) = 4e-19
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +3
Query: 36 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 215
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 216 KVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNK 395
LL + +I ++ S A QW +++ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 396 QNVERAKSDLLAALK-VLDGH 455
+ VE+ K++L L+ VLD +
Sbjct: 104 KTVEQYKNELNGQLQYVLDAN 124
Score = 54.0 bits (124), Expect(2) = 4e-19
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +3
Query: 537 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNKKE 716
Q+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL+ K
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELSAKVAKSA 177
Query: 717 GK 722
K
Sbjct: 178 PK 179
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFE 203
MA +LY+Y + A++ IA D + P +F E +K+ +F+K PA KVP
Sbjct: 1 MAKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL- 59
Query: 204 SADGKVLLTESNAIAYYV 257
+ LTES AI Y+
Sbjct: 60 -VINGLSLTESLAIIEYL 76
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 540 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 692
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 540 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 692
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 120 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 299
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 300 RVWQ 311
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 120 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 299
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 300 RVWQ 311
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 120 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 299
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 300 RVWQ 311
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 270 DFHWQRSKRWHCFQLEAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 121
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 54 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 215
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 216 KVLLTESNAIAYYV 257
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 176 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 45
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 318 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 437
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -2
Query: 314 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*KHLSIGT-FECRHFSGRKLLQEVFGLVG 144
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 143 LAKYEIR 123
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 150 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 257
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 150 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 257
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 162 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 257
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 360 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 488
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 177 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 88
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,073
Number of Sequences: 27780
Number of extensions: 405620
Number of successful extensions: 1222
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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