Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4a09
         (456 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    25   1.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.7  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.7  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   3.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   5.1  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   6.7  
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    23   6.7  

>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 320 EICIKQKNLLSKICGSFMFIIVYYYETSVMYNVHL 424
           E C+      SK C SF +  V  Y+ SV+ + +L
Sbjct: 172 EYCLTSSECCSKSCLSFAYKCVNRYDLSVVADPNL 206


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/49 (20%), Positives = 22/49 (44%)
 Frame = -3

Query: 454 FFFCIILFISQMYIIHYRCFIIIYNYKHEATADFR*QVFLFYTYFQWLP 308
           +F CI+  ++   ++     +++ NY H          ++   + QWLP
Sbjct: 297 YFNCIMFMVASSVVLT----VVVLNYHHRTADIHEMPPWIKSVFLQWLP 341


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/49 (20%), Positives = 22/49 (44%)
 Frame = -3

Query: 454 FFFCIILFISQMYIIHYRCFIIIYNYKHEATADFR*QVFLFYTYFQWLP 308
           +F CI+  ++   ++     +++ NY H          ++   + QWLP
Sbjct: 297 YFNCIMFMVASSVVLT----VVVLNYHHRTADIHEMPPWIKSVFLQWLP 341


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 95   AKCLARYLKYKYYLSINCFSENPR-SSLTIISEHTH*EEFE 214
            A+ L+ +  ++ YL+IN F+E+P   S   + E+ H   FE
Sbjct: 984  AQVLSGHGFFREYLAINGFTESPDCRSCAGVPENAHHAIFE 1024


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 451 FFCIILFISQMYIIHYRCFIIIYNY 377
           FF +I+F+   Y+++    I+  +Y
Sbjct: 406 FFIVIIFLGSFYLVNLILAIVAMSY 430


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 193 YALRRIRDAFKDNKNVSDVKIV 258
           +  + I+DA KDN+ V D K V
Sbjct: 436 FIAQHIKDADKDNEIVEDWKFV 457


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 202 RRIRDAFKDNKNVSDVKIVKKEFEFGKENLNVIRRQAAI 318
           R   +AF+D  + SD + + K+F+ G E +   R+Q  +
Sbjct: 52  REATEAFEDVGHSSDAREMMKKFKVG-ELIEAERKQIPV 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,636
Number of Sequences: 2352
Number of extensions: 8101
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)