Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4a04
(576 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9G831 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 50 5e-05
UniRef50_P03896 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 38 0.13
UniRef50_Q7YHM3 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 38 0.22
UniRef50_Q2TCR6 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 1.6
UniRef50_P34848 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.1
UniRef50_Q6IT36 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 4.8
UniRef50_Q36426 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 4.8
UniRef50_A5VAN3 Cluster: Proton-translocating NADH-quinone oxido... 33 6.4
UniRef50_Q9MNX8 Cluster: NADH dehydrogenase subunit 2; n=2; Pleo... 33 6.4
UniRef50_Q70XS9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 6.4
UniRef50_A0MCU5 Cluster: NADH dehydrogenase subunit 2; n=1; Pria... 33 6.4
UniRef50_Q8WGE1 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 32 8.4
UniRef50_Q0ZD18 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 32 8.4
>UniRef50_Q9G831 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=16; Ditrysia|Rep: NADH-ubiquinone oxidoreductase chain
2 - Bombyx mori (Silk moth)
Length = 340
Score = 49.6 bits (113), Expect = 5e-05
Identities = 33/90 (36%), Positives = 36/90 (40%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
QTSLRKLLAFSSINNLG +IFSI+I E
Sbjct: 172 QTSLRKLLAFSSINNLGWMIFSIMISENLWLFYFLIYSMMIFMMISLFFLMNMYFMNQLF 231
Query: 241 XXXXXXXXXXXXXXXXXXXGGLPPFMGFIP 330
GGLPPFMGF+P
Sbjct: 232 INNMNFFIKLNLLINFLSLGGLPPFMGFMP 261
>UniRef50_P03896 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=304; Dicondylia|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Drosophila melanogaster (Fruit fly)
Length = 341
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QTSLRKL+AFSSIN+LG ++ S++I E
Sbjct: 168 QTSLRKLMAFSSINHLGWMLSSLMISE 194
>UniRef50_Q7YHM3 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=13; Neoptera|Rep: NADH-ubiquinone oxidoreductase chain
2 - Lepidopsocidae sp. RS-2001
Length = 344
Score = 37.5 bits (83), Expect = 0.22
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIII 135
QTSLRK+LAFSSIN+LG +I S+I+
Sbjct: 174 QTSLRKILAFSSINHLGWMISSMIL 198
>UniRef50_Q2TCR6 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=5; Insecta|Rep: NADH-ubiquinone oxidoreductase chain 2
- Petrobius brevistylis
Length = 346
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QT LRKL+AFSSIN+L I+ S++I E
Sbjct: 169 QTMLRKLMAFSSINHLAWIMSSMLISE 195
>UniRef50_P34848 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=9; Pterygota|Rep: NADH-ubiquinone oxidoreductase chain
2 - Anopheles gambiae (African malaria mosquito)
Length = 341
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QTS+RKL+AFSSIN+LG ++ +++ E
Sbjct: 168 QTSIRKLMAFSSINHLGWMLLAMMNNE 194
>UniRef50_Q6IT36 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Philaenus spumarius|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Philaenus spumarius (Meadow
spittlebug)
Length = 330
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIII 135
Q+S++KL+A+SSINN+G II + I
Sbjct: 161 QSSMKKLMAYSSINNMGWIIMGMTI 185
>UniRef50_Q36426 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=24; Neoptera|Rep: NADH-ubiquinone oxidoreductase chain
2 - Locusta migratoria (Migratory locust)
Length = 342
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QTSLR++LA+SSI++LG +I S+ I E
Sbjct: 168 QTSLRQILAYSSISHLGWMISSMTISE 194
>UniRef50_A5VAN3 Cluster: Proton-translocating NADH-quinone
oxidoreductase, chain N precursor; n=3;
Alphaproteobacteria|Rep: Proton-translocating
NADH-quinone oxidoreductase, chain N precursor -
Sphingomonas wittichii RW1
Length = 481
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSI 129
QTS+++LLA+SSINN+G +F +
Sbjct: 291 QTSMKRLLAYSSINNVGFALFGL 313
>UniRef50_Q9MNX8 Cluster: NADH dehydrogenase subunit 2; n=2;
Pleocyemata|Rep: NADH dehydrogenase subunit 2 - Pagurus
longicarpus (Long-clawed hermit crab)
Length = 336
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QTSLRK++AFSSIN++ ++ + I+ E
Sbjct: 164 QTSLRKIMAFSSINHIAWLLSAAILSE 190
>UniRef50_Q70XS9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Scutigera coleoptrata|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Scutigera coleoptrata (House
centipede)
Length = 331
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
Q+SLRKL+A+SSIN++G I+ ++ I +
Sbjct: 166 QSSLRKLMAYSSINHMGWILATMYIND 192
>UniRef50_A0MCU5 Cluster: NADH dehydrogenase subunit 2; n=1;
Priapulus caudatus|Rep: NADH dehydrogenase subunit 2 -
Priapulus caudatus
Length = 342
Score = 32.7 bits (71), Expect = 6.4
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIII 135
QTSLRKLLA+SSI +LG ++ +I I
Sbjct: 170 QTSLRKLLAYSSIGHLGWMLGAIFI 194
>UniRef50_Q8WGE1 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Jaxea nocturna|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Jaxea nocturna
Length = 330
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QT LR ++AFSSIN++G ++ ++II E
Sbjct: 161 QTLLRSIMAFSSINHMGWMLSALIISE 187
>UniRef50_Q0ZD18 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=2; Campodea|Rep: NADH-ubiquinone oxidoreductase chain
2 - Campodea fragilis
Length = 334
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 61 QTSLRKLLAFSSINNLG*IIFSIIIRE 141
QTSL+K++AFSSIN++ ++ +I I E
Sbjct: 167 QTSLKKIMAFSSINHISWMLVAISINE 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,486,596
Number of Sequences: 1657284
Number of extensions: 1008295
Number of successful extensions: 2118
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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