Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3p18
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 332 5e-91
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 332 5e-91
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 332 5e-91
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 332 5e-91
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 332 5e-91
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 332 5e-91
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 332 5e-91
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 331 1e-90
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 330 2e-90
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 256 5e-68
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 8e-59
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 1e-43
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 142 1e-33
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 100 5e-21
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.28
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 38 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 97
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 98 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 157
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 158 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 217
Query: 542 PLEPTSE 562
P P SE
Sbjct: 218 PTTPISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 38 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 97
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 98 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 157
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 158 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 217
Query: 542 PLEPTSE 562
P P SE
Sbjct: 218 PTTPISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 332 bits (817), Expect = 5e-91
Identities = 160/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 331 bits (813), Expect = 1e-90
Identities = 159/187 (85%), Positives = 170/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 330 bits (812), Expect = 2e-90
Identities = 159/187 (85%), Positives = 169/187 (90%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 361
IAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMI
Sbjct: 99 IAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI 158
Query: 362 HSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 541
HSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +
Sbjct: 159 HSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL 218
Query: 542 PLEPTSE 562
P P SE
Sbjct: 219 PTTPISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 256 bits (627), Expect = 5e-68
Identities = 121/140 (86%), Positives = 127/140 (90%)
Frame = +2
Query: 143 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 322
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 323 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 502
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 503 DHILVTEPKDEPVPLEPTSE 562
DH+ + EPKDE +P P SE
Sbjct: 121 DHVSIVEPKDEILPTTPISE 140
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 8e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +2
Query: 71 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 250
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 251 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 430
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 431 LGIKVKI 451
V +
Sbjct: 126 WDTSVHL 132
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (425), Expect = 1e-43
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = +2
Query: 266 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 445
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 446 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 562
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 142 bits (343), Expect = 1e-33
Identities = 70/79 (88%), Positives = 75/79 (94%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCA 181
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCA
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCA 98
Query: 182 IAQAESLRYKLIGGLAVRR 238
IAQAESLRYKL+GGLAVRR
Sbjct: 99 IAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 100 bits (239), Expect = 5e-21
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 2 VRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 172
VRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 39 VRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 34.7 bits (76), Expect = 0.28
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 409 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 549
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,492,891
Number of Sequences: 237096
Number of extensions: 2198734
Number of successful extensions: 13776
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13773
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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