Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3p16
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 32 0.38
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 31 0.67
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 31 0.67
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.67
U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 29 2.7
Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 29 2.7
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81537-1|CAB04372.1| 326|Caenorhabditis elegans Hypothetical pr... 28 8.2
L23645-3|AAK26139.1| 211|Caenorhabditis elegans Zinc finger pro... 28 8.2
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 128 bits (310), Expect = 3e-30
Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 4/121 (3%)
Frame = +2
Query: 353 RHFHTSH-AVNKIVAFKLSDIGEGIREVVIKEWFVKVGDNVQQFDNICEVQSDKAAVTIT 529
+H HTS A +V FKLSDIGEGI EV +KEW+VK GD + QFD +CEVQSDKAAVTI+
Sbjct: 18 KHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWYVKEGDTISQFDKVCEVQSDKAAVTIS 77
Query: 530 SRYDGIITRLYHDIDQTALVGQPLVDIDVQDS--ENDGKPTDVAPDKPVA-EIDAPKTEQ 700
RYDGI+ +LYH++D A VGQ L+D++++ + E + + A P A + APK +
Sbjct: 78 CRYDGIVKKLYHEVDGMARVGQALIDVEIEGNVEEPEQPKKEAASSSPEAPKSSAPKAPE 137
Query: 701 N 703
+
Sbjct: 138 S 138
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 42.7 bits (96), Expect = 3e-04
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Frame = +2
Query: 215 ILVRRSVFQLRTVNRCRKIKVTTQSARNGSQLSYKTPLNESLSKELR-----HFHTSHA- 376
+L RR+V R ++R + VT S+ S L KT L E L + +R +FH S
Sbjct: 1 MLGRRAVSVHRFLSRAARQSVTAASSAQPS-LQAKTSLLEPLVQNVRITSSANFHMSAVR 59
Query: 377 VNKIVAFKLSDIGEGIREVVIKEWFVKVGDNVQQFDNICEVQSDKAAVTITSRYDGIITR 556
++ ++ + E I E I+ W + GD+V + + + E+++DK +V + + G I
Sbjct: 60 MSDVITVEGPAFAESISEGDIR-WLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIVE 118
Query: 557 LYHDIDQTALVGQPLVDIDVQDSENDGKPTDVAPDKPVAEIDAPKTEQNQ 706
+ Q L + Q G + A ++P + AP E+++
Sbjct: 119 FLVEDGAKVTAKQKLYKL--QPGAGGGSSSAPAKEEPKS---APAKEESK 163
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 437 IKEWFVKVGDNVQQFDNICEVQSDKAAVTITSRYDGIITRL 559
+ W K GD + + D +CE+++DKA + + +G + ++
Sbjct: 94 VVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKI 134
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -1
Query: 615 TSISTRGCPTRAV*SISWY--SRVMIPSYRLVMVTAALS-LCTSQMLSNC*TLSPTLTNH 445
T+ ++ PT WY R P+Y + AL T+Q + T PT T
Sbjct: 157 TAAPSQPIPTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTT 216
Query: 444 SLMTTSRIPSPISESLKATILLT 376
+ TT+ P P + + + T T
Sbjct: 217 ATTTTTTTPLPTTTTTQPTTTTT 239
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -1
Query: 615 TSISTRGCPTRAV*SISWY--SRVMIPSYRLVMVTAALS-LCTSQMLSNC*TLSPTLTNH 445
T+ ++ PT WY R P+Y + AL T+Q + T PT T
Sbjct: 153 TAAPSQPIPTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTT 212
Query: 444 SLMTTSRIPSPISESLKATILLT 376
+ TT+ P P + + + T T
Sbjct: 213 ATTTTTTTPLPTTTTTQPTTTTT 235
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -1
Query: 615 TSISTRGCPTRAV*SISWY--SRVMIPSYRLVMVTAALS-LCTSQMLSNC*TLSPTLTNH 445
T+ ++ PT WY R P+Y + AL T+Q + T PT T
Sbjct: 96 TAAPSQPIPTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTT 155
Query: 444 SLMTTSRIPSPISESLKATILLT 376
+ TT+ P P + + + T T
Sbjct: 156 ATTTTTTTPLPTTTTTQPTTTTT 178
>U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical
protein B0507.10 protein.
Length = 402
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 458 VGDNVQQFDNICEVQSDKAAVTITSRYDGIITRLYHDIDQTALVGQPLVDIDVQDSEND 634
+ DN +QF C ++ S Y+ I +L + ID G+PL+D D++D +D
Sbjct: 214 IEDNFEQFRQHCRNLINRHRAFCNS-YNSIEAQLMN-IDNRMKAGRPLIDFDMEDLLSD 270
>AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical
protein F54E2.5 protein.
Length = 710
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 727 VVNTLNFLVLFRFRSVYFSNRLIRRNVCGFPVIFRVLHV 611
+ + ++ L+ F S+ FSN +I + C FP +F VL++
Sbjct: 479 IFSFISHLIDFCHYSILFSNLVIAIHPCQFPAVFLVLNI 517
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 173 LFKIRVLSSFIAMSILVRRSV-FQLRTVNRCRKIKVTTQSARNGSQLSYKTPLNESLSKE 349
L K ++L S +V R + FQ + + +T +R + + NE LS E
Sbjct: 49 LVKKKLLESIELQQFIVGRDIEFQEKYI-----ASLTDGLSRYNNHNELEEIRNEKLSSE 103
Query: 350 LRHFHTSHAVNKIVAFKLSDIGEGIRE 430
RHF A NK+ ++ + G RE
Sbjct: 104 ERHFELESARNKLNGLRIQNSNFGRRE 130
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 527 TSRYDGIITRLYHDIDQTALVGQPLVDIDVQDSENDGKPTD 649
T+RY I T+ Y ++A+ P I++Q E+DG D
Sbjct: 235 TNRYSCIGTKEYGSPHESAISDSPFFTIELQKQESDGNSGD 275
>Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical
protein F59A1.12 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +2
Query: 116 DNAQL*SRPNTGLASCSL*LFKIRVLSSFIAMSILVRRSVFQLRTVNRCRKIK-----VT 280
DN +RPN GLA C + + + S IL + +L N+ R++ +
Sbjct: 11 DNRIKYTRPNDGLADCGEWIQYLNRVVSLTTCIILHIHIILRLLIANKIRQMNDYQKLII 70
Query: 281 TQSARNGSQLSYKTPLNESLSKELRHFHTSHA 376
QS N S++ LNE + + + H+
Sbjct: 71 VQSIINILACSFEMVLNEIQTSNINYVKIGHS 102
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 527 TSRYDGIITRLYHDIDQTALVGQPLVDIDVQDSENDGKPTD 649
T+RY I T+ Y ++A+ P I++Q E+DG D
Sbjct: 235 TNRYSCIGTKEYGSPHESAISDSPFFTIELQKQESDGNSGD 275
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 751 AAILLTAGVVNTLNFLVLFRFRSVYFSNRLI 659
AA LTA VNT +L F SVY +N +
Sbjct: 388 AAAFLTASAVNTSQLALLAGFSSVYLNNAFV 418
>Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical
protein F58E10.1b protein.
Length = 709
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 529 SDGDSCLVALYFANVVELLNIITDFDEPFLDDDFSYPFTD 410
S GD C V F +V+ + ++ D+P LDD+F Y D
Sbjct: 259 SVGDLCSV---FNDVMSVRSLAEGSDDPLLDDEFRYDEED 295
>Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical
protein F58E10.1a protein.
Length = 694
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 529 SDGDSCLVALYFANVVELLNIITDFDEPFLDDDFSYPFTD 410
S GD C V F +V+ + ++ D+P LDD+F Y D
Sbjct: 244 SVGDLCSV---FNDVMSVRSLAEGSDDPLLDDEFRYDEED 280
>Z81537-1|CAB04372.1| 326|Caenorhabditis elegans Hypothetical
protein F41D3.1 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -3
Query: 577 LINIMVQSCYDTVVSASDGDSCLVALYFANVVELLNIITDFDEPFLDDDFSYPFTDIRKL 398
L+ V DT+ + D+ + AL ++VEL I + LDD + P D+ L
Sbjct: 119 LLKYYVDGVEDTIAQKQN-DNVMNALQIKSIVELHKISEMENNVVLDDCLNCPGVDV--L 175
Query: 397 ESDD 386
E DD
Sbjct: 176 EQDD 179
>L23645-3|AAK26139.1| 211|Caenorhabditis elegans Zinc finger
protein protein 1,isoform b protein.
Length = 211
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 293 RNGSQLSYKTPLNESLSKELRHFHTSHAVNKIVAFKLSDIGEGIREVVI 439
+NG L K+P N+ L++EL+ F + + L+D + R V +
Sbjct: 140 KNGGNLDSKSPKNQKLAEELQQFIDNPGLGSNETSTLTDDNDVPRVVAV 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,981,776
Number of Sequences: 27780
Number of extensions: 327448
Number of successful extensions: 999
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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