Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3p10
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 206 2e-53
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 206 2e-53
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 200 1e-51
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 190 7e-49
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 187 7e-48
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 177 5e-45
U29097-10|AAA68414.1| 348|Caenorhabditis elegans Serpentine rec... 31 1.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 29 3.6
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 29 3.6
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 28 6.4
U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical pr... 28 6.4
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 28 6.4
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 28 6.4
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 28 6.4
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 28 6.4
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 28 6.4
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 28 6.4
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 28 6.4
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 28 6.4
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 206 bits (502), Expect = 2e-53
Identities = 93/160 (58%), Positives = 109/160 (68%)
Frame = +3
Query: 288 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKD 467
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL P AIY D
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 89
Query: 468 PFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLRXX 647
PFR+G + LVMC+TY +PT +N R C+E +K D PWFG+EQEY LLD D
Sbjct: 90 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 149
Query: 648 XXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
YYCGVGANKV+ RD+VEAHYR CLYAG
Sbjct: 150 GWPKNGFPGPQGPYYCGVGANKVYGRDIVEAHYRACLYAG 189
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 206 bits (502), Expect = 2e-53
Identities = 93/160 (58%), Positives = 109/160 (68%)
Frame = +3
Query: 288 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKD 467
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL P AIY D
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 92
Query: 468 PFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLRXX 647
PFR+G + LVMC+TY +PT +N R C+E +K D PWFG+EQEY LLD D
Sbjct: 93 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 152
Query: 648 XXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
YYCGVGANKV+ RD+VEAHYR CLYAG
Sbjct: 153 GWPKNGFPGPQGPYYCGVGANKVYGRDIVEAHYRACLYAG 192
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 200 bits (487), Expect = 1e-51
Identities = 87/180 (48%), Positives = 115/180 (63%)
Frame = +3
Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
L + + + LP K ATY+WIDG+GEHLR K RT+N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 408 NQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDD 587
QADG NSD YL P A++ DPF G ++LVMCDT + M+PT +N+R C E K D
Sbjct: 72 GQADGLNSDRYLRPVAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQ 131
Query: 588 EPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
+PWFG+EQEY+++D D YYCG+GA++ F R++VE HYR CL+AG
Sbjct: 132 QPWFGMEQEYLIVDRDEHPLGWPKHGYPAPQGKYYCGIGADRAFGREVVETHYRACLHAG 191
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 190 bits (464), Expect = 7e-49
Identities = 83/180 (46%), Positives = 113/180 (62%)
Frame = +3
Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
L + + + LP K ATY+WIDG+GE LR K RT N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 408 NQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDD 587
QA+G NSD YL P A++ DPF +G+++LVMC+T M+PT +N+R +C K +
Sbjct: 72 GQAEGLNSDRYLRPVAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEH 131
Query: 588 EPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
PWFG+EQEY+++D D YYCGVGA++ F R++VE HYR CL+AG
Sbjct: 132 HPWFGMEQEYLIVDRDEHPLGWPKHGYPAPQGKYYCGVGADRAFGREVVETHYRACLHAG 191
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 187 bits (456), Expect = 7e-48
Identities = 84/180 (46%), Positives = 114/180 (63%)
Frame = +3
Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
L ++ ++ L KI ATY+WIDG+GE+LR K RT + +PK +D PIWN+DGSST
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 408 NQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDD 587
QA G +SD YL P A Y DPF G + LVMCDT + M+PT +++R +C E + +D
Sbjct: 72 GQAKGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDT 131
Query: 588 EPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
PWFG+EQEY+++D D YYC VGA++ F R++VE HYR CL+AG
Sbjct: 132 RPWFGMEQEYLIVDRDEHPLGWPKHGFPDPQGKYYCSVGADRAFGREVVETHYRACLHAG 191
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 177 bits (432), Expect = 5e-45
Identities = 75/158 (47%), Positives = 104/158 (65%)
Frame = +3
Query: 294 YIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKDPF 473
YIWID + E++R K +T +F PK P DLPIWNFDG+ST Q+ G SD Y+ P A+Y+DPF
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIALYRDPF 94
Query: 474 RRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLRXXXX 653
R G + + +C+T ++ +P +N R C + +K KD EPWFG+EQE+ LL +D
Sbjct: 95 RPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGADKHPYNW 154
Query: 654 XXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAG 767
YYCGVG+++VF R ++EAHYR C+YAG
Sbjct: 155 PVNGFPAPQGPYYCGVGSDRVFGRHILEAHYRACMYAG 192
>U29097-10|AAA68414.1| 348|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 29 protein.
Length = 348
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 593 GLIILAFVVSFLTTDAIVALCWLHVVFIRITHNEDVISSTEWILVNSTRYEVGIRIV 423
G I++ VVSF+TT V W VF T N + + I ST E+ ++ V
Sbjct: 27 GFILMIIVVSFITTALAVQTLWYKNVFPFCTKNLLLSAIVNGIFHQSTVAEIRLKTV 83
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 640 APSGGPRVVSPHRKGHTTAVSVPTKSLPETLSKPT 744
A S PR H KG + S P + +PETLS+ T
Sbjct: 91 ASSSQPREEIIHGKGESVYSSFPCQVIPETLSRMT 125
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 640 APSGGPRVVSPHRKGHTTAVSVPTKSLPETLSKPT 744
A S PR H KG + S P + +PETLS+ T
Sbjct: 91 ASSSQPREEIIHGKGESVYSSFPCQVIPETLSRMT 125
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 581 LAFVVSFLTTDAIVALCWLH 522
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 581 LAFVVSFLTTDAIVALCWLH 522
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical
protein T20F5.4 protein.
Length = 333
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 632 RSAPLRVAPGWFPPTARAILLRCRCQQSLCQRPC--RSP 742
+ APLR +P PP RA+ + + Q Q PC RSP
Sbjct: 261 KPAPLRFSPARSPPVRRALPIELKPTQHFAQ-PCKIRSP 298
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDL 638
DPF ++ L +T + R+ A + ++ P ++++YILLD+D+
Sbjct: 68 DPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDV 125
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 141 KMADTAHTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPLP 272
K + HT E P+IL P++ + P + + +N+L P
Sbjct: 375 KQEEQEHTNGEKKPEILDEPIIQDEPRTMRPHEHCAIFNNLSTP 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,044,709
Number of Sequences: 27780
Number of extensions: 435707
Number of successful extensions: 1239
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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