Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3p02
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 169 2e-42
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 128 5e-30
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 114 6e-26
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 81 9e-16
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 42 4e-04
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 38 0.011
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 35 0.080
AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine r... 31 0.74
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 31 1.3
U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 3.0
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 4.0
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 9.1
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 28 9.1
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 9.1
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 28 9.1
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 169 bits (411), Expect = 2e-42
Identities = 74/154 (48%), Positives = 110/154 (71%)
Frame = +1
Query: 31 KLQEYKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELIC 210
++Q+ D++++ L++ S T EQK GV RL++ LG+V LYL+FG A+L+C
Sbjct: 6 QVQKVLDDVDKQLHEPSTV-TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVC 64
Query: 211 NSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 390
N +GFVYPAYMS+KA+ES K+DDT+WLTYWV++A S+VE+FS IV FP+YWL K I
Sbjct: 65 NFMGFVYPAYMSIKAIESSNKEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSI 124
Query: 391 FVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 492
F+++ YLP+ + G+ +Y+R ++P +H G ID
Sbjct: 125 FLLYLYLPS-FLGAAKLYHRFVKPVAARHSGSID 157
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 128 bits (309), Expect = 5e-30
Identities = 60/155 (38%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
Frame = +1
Query: 112 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 291
E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 292 LTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY-- 465
L YW V+ FSI+++F+ I+ +FP+YW+ K F+++ YLP E +GS VIY+++I P+
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPFVA 167
Query: 466 -YQKHHGR-IDDMANTGKQD*NAVLMQSKKL*CFP 564
+K R + A T D + L + + C P
Sbjct: 168 HMEKSMSRKLPANAGTVPNDQGSALDANNNINCLP 202
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 114 bits (275), Expect = 6e-26
Identities = 51/108 (47%), Positives = 71/108 (65%)
Frame = +1
Query: 139 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYAC 318
Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140
Query: 319 FSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 462
+V++FS+ I+ WFP Y++ K F+++ YLP + GS++ Y I+ P
Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 196 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVG-WFPLY 372
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A +S +E D ++ WFP Y
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65
Query: 373 WLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTGKQD 519
+ LK +F+ W P G+ ++Y + + P +H ID + + K +
Sbjct: 66 FQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDIDALLESAKSE 113
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 190 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYF-SDFIVGWF- 363
F A + N IG V P S K L+ P K + + YW +Y F IV++F S F V F
Sbjct: 3 FLARGLSNLIGIVAPVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCFI 62
Query: 364 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 501
P Y F + +P + V+Y + + P+ +K+ RID+++
Sbjct: 63 PFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLRKYERRIDNIS 107
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 142 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 315
IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 316 CFSIVEYF 339
++++ F
Sbjct: 134 ILAVIDQF 141
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +1
Query: 22 MASKLQEYKDNIEQSLNDKSKP-WT-KYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFG 195
MA+ + + + I + L ++K W K F AE+ G+ R I +Y++ G
Sbjct: 1 MATIIAKIESKINEYLKARNKEDWKEKTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGNF 60
Query: 196 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 336
L + I +P S L QK+ L YW++YA S+ +Y
Sbjct: 61 LPLFSHIICIFWPVKESFMILRQ-QKNPSDNILLYWILYAMVSLFDY 106
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 112 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 285
E VG L I L LYL+ G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 286 KWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 387
L YW +Y ++++ F+ G Y L KC
Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 34.7 bits (76), Expect = 0.080
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 330 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPRDLLPYHSS--LLPEASWSYR*YGQ 503
GV F FHRR S+V ++ + + +L + L+PY + LP ASW YR G+
Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238
Query: 504 HRETRLKCRFNAIKKIIMLPV 566
+E +L+ +I ++++ V
Sbjct: 239 EKE-KLEAENMSISWVLVVSV 258
>AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine
receptor, class i protein46 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/114 (19%), Positives = 51/114 (44%)
Frame = +1
Query: 148 LGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 327
+G++ FTG+++VF A +++ + A ++ A ++ K L + +C +
Sbjct: 209 VGVMGFTGIFVVFQAIAMTTMDTMKMLKGARKTISAQSYDRQRSAMKSLIAQFLASCLLV 268
Query: 328 VEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 489
+ S +++ +P+ + + + + T + + VI PY GRI
Sbjct: 269 LPAASFYVISVYPINYGQEIVNISMAIFATRSSVNAVILVATTPPYRAFLFGRI 322
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Frame = +1
Query: 100 FELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 279
F E+ G R + F G + ++ I + + P +M++ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 280 DTKWLT--------YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 405
+ +L YW VYA F E F ++ W L + IF+ C
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195
>U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical
protein T10E9.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 298 YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 414
YW ++ F Y D I+ + PLY+++K I +LP
Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 301 WVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 408
++ AC +S GW +YWLL C+ + +W Y
Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 613 KKRAGLIGLSDGICHQTGSIIIFLIALKRHFNLVSLCW 500
K+ G IG+ G C Q G++ +IA+ + F L W
Sbjct: 148 KQNRGAIGMMTGTCVQLGTVCGSVIAMPQIFGTEDLWW 185
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 263 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPK 147
DS DMYA LH + P P+ KY P N++ P+
Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618
>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 355 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 483
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -1
Query: 809 LISLFGYQNTLIKLTNRNL-ISSTF*FI--KTISF*NMKFIYFLN*ILYWRISEVLKFVL 639
L S F ++N L + I ST I K F + +++ L+ I YW + + F+L
Sbjct: 986 LASFFLFENIFFLLVLAGIFIQSTVYLIEEKICKFAHQQYLTGLSTIAYWGVVFLWDFLL 1045
Query: 638 FKFYL 624
F F+L
Sbjct: 1046 FTFFL 1050
>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 355 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 483
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,023,241
Number of Sequences: 27780
Number of extensions: 436768
Number of successful extensions: 1276
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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