Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3o23
         (435 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA...    33   0.22 
AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p pro...    28   4.8  
AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-P...    28   4.8  
AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-P...    28   4.8  
AE014296-2272|AAN11836.1|  626|Drosophila melanogaster CG32121-P...    28   6.3  

>AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA
           protein.
          Length = 816

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +2

Query: 89  YEHSVHLLMDFSNPKDMNSAEETSWWEIHSKAEWYFAKKSAKNRDFVQAYN--STWLDVF 262
           YEH    +   S+   M   +   WW++    E ++++ +   R+ +  YN  S WL + 
Sbjct: 230 YEHEFGSMYQTSDYMYMKDFKTWQWWKLMGLGEHWYSESNYILRENIYEYNQESNWLTMM 289

Query: 263 AEIFL*YI*ATFNTEFY 313
            ++   Y+   ++ + Y
Sbjct: 290 KDVKKFYMPVDYSRDLY 306


>AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p
           protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 131 KDMNSAEETSWWEIHSKAEWYFAKKSAKNRD 223
           + +NSA+ T WW  H + E     +  + RD
Sbjct: 64  RTLNSADYTDWWARHQEIEMSLENRERRLRD 94


>AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-PA,
            isoform A protein.
          Length = 1494

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 131  KDMNSAEETSWWEIHSKAEWYFAKKSAKNRD 223
            + +NSA+ T WW  H + E     +  + RD
Sbjct: 996  RTLNSADYTDWWARHQEIEMSLENRERRLRD 1026


>AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-PB,
            isoform B protein.
          Length = 1517

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 131  KDMNSAEETSWWEIHSKAEWYFAKKSAKNRD 223
            + +NSA+ T WW  H + E     +  + RD
Sbjct: 996  RTLNSADYTDWWARHQEIEMSLENRERRLRD 1026


>AE014296-2272|AAN11836.1|  626|Drosophila melanogaster CG32121-PA
           protein.
          Length = 626

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +3

Query: 93  SIRFTCSWTSAIPRT*IVLRKH----HGGKFIPKQNGTSQKKVQKTVTSSRHTT 242
           ++R+ C+  S + R+   LRKH    H G   P +N   +K+V K   ++  T+
Sbjct: 474 NVRYACNVCSHVSRSKDALRKHVSYRHPGAPSPCENEARRKRVSKLAATTVPTS 527


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,695,377
Number of Sequences: 53049
Number of extensions: 250669
Number of successful extensions: 528
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)