Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3o22
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U23525-4|AAU05558.1|  455|Caenorhabditis elegans Nematode astaci...    29   2.8  
Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical
           protein R05H10.7 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/61 (32%), Positives = 34/61 (55%)
 Frame = -1

Query: 355 TKICTSGHKLITSFTLCRHPFQDIKTDCFTNIIPSTDNSKVRYYLSR*TDDKSCRLKTNF 176
           ++ C+ G++++    L +H F+ +KT  +T I+ S  N  ++      TDD S  LK NF
Sbjct: 167 SETCSFGNQVL----LEKHGFKCLKTIPYTGIVDSQGNQILK------TDDGSTELKLNF 216

Query: 175 K 173
           K
Sbjct: 217 K 217


>U23525-4|AAU05558.1|  455|Caenorhabditis elegans Nematode astacin
           protease protein11, isoform b protein.
          Length = 455

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -1

Query: 151 CISLNELTTPPRGFTHVKFVIDK*LLVSLTATLMKVFDKCELPVMTYS 8
           CI   EL++PP G   V + +D   L       MK   + ELP+ T++
Sbjct: 375 CIRFKELSSPPTGSHIVYYKVDSPTLTK-ELQFMKQCMRSELPISTFA 421


>Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical
           protein R13G10.2 protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 367 YYNTTKICTSGHKLITSFTLCRHPFQDIKTDCFTNI 260
           YY     C+   KLITS +L      D K DC + I
Sbjct: 134 YYAKCHQCSKYSKLITSDSLSAQQLSDFKCDCASTI 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,445,202
Number of Sequences: 27780
Number of extensions: 326034
Number of successful extensions: 614
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)