Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3o16
(763 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p pro... 294 7e-80
AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC... 294 7e-80
AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB... 294 7e-80
AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA... 294 7e-80
Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase, ... 223 2e-58
AE013599-3476|AAF46906.3| 271|Drosophila melanogaster CG30266-P... 33 0.56
BT023123-1|AAY55539.1| 572|Drosophila melanogaster IP10857p pro... 30 4.0
BT023067-1|AAY55483.1| 572|Drosophila melanogaster IP10957p pro... 30 4.0
BT022975-1|AAY55391.1| 572|Drosophila melanogaster IP11157p pro... 30 4.0
>AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p
protein.
Length = 297
Score = 294 bits (722), Expect = 7e-80
Identities = 142/214 (66%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Frame = +3
Query: 120 AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 299
A + Q R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 300 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 476
QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L++ A N KV CVGD
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134
Query: 477 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 656
KSR IL RLYGK+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVS
Sbjct: 135 KSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVS 194
Query: 657 YAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSY 758
Y S LP+++ ++E + KL YDSLDSDV++SY
Sbjct: 195 YQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
>AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC,
isoform C protein.
Length = 297
Score = 294 bits (722), Expect = 7e-80
Identities = 142/214 (66%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Frame = +3
Query: 120 AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 299
A + Q R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 300 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 476
QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L++ A N KV CVGD
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134
Query: 477 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 656
KSR IL RLYGK+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVS
Sbjct: 135 KSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVS 194
Query: 657 YAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSY 758
Y S LP+++ ++E + KL YDSLDSDV++SY
Sbjct: 195 YQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
>AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB,
isoform B protein.
Length = 297
Score = 294 bits (722), Expect = 7e-80
Identities = 142/214 (66%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Frame = +3
Query: 120 AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 299
A + Q R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 300 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 476
QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L++ A N KV CVGD
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134
Query: 477 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 656
KSR IL RLYGK+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVS
Sbjct: 135 KSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVS 194
Query: 657 YAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSY 758
Y S LP+++ ++E + KL YDSLDSDV++SY
Sbjct: 195 YQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
>AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA,
isoform A protein.
Length = 297
Score = 294 bits (722), Expect = 7e-80
Identities = 142/214 (66%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Frame = +3
Query: 120 AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 299
A + Q R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 300 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 476
QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L++ A N KV CVGD
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134
Query: 477 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVS 656
KSR IL RLYGK+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVS
Sbjct: 135 KSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVS 194
Query: 657 YAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSY 758
Y S LP+++ ++E + KL YDSLDSDV++SY
Sbjct: 195 YQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
>Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase,
gamma subunit protein.
Length = 169
Score = 223 bits (546), Expect = 2e-58
Identities = 111/155 (71%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Frame = +3
Query: 120 AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 299
A + Q R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 300 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 476
QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L++ A N KV CVGD
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134
Query: 477 KSRGILQRLYGKHIISVANEIGRLPPTFLDASQLA 581
KSR IL RLYGK+I+ VANE+GRLPPTFLDAS++A
Sbjct: 135 KSRAILSRLYGKNILMVANEVGRLPPTFLDASKIA 169
>AE013599-3476|AAF46906.3| 271|Drosophila melanogaster CG30266-PA
protein.
Length = 271
Score = 32.7 bits (71), Expect = 0.56
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = -3
Query: 749 EHVAVQRVVRS-QLAGALNRLLSVEGQ--VGLGVRDHRLELVVNDL-SGTKLVSRGEDSS 582
E+ ++R+V S L +L+ EG VGL + ++ +N++ S + + R D++
Sbjct: 24 ENERIKRIVESGDLEQLAEIVLNGEGGSLVGLKSPEPEIQAFLNNVPSYMEKIHRVHDAA 83
Query: 581 --GQLTCVQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAE--TVADH 414
G L +Q++ I+ + + + A HTD + L++RF E T+ D+
Sbjct: 84 RDGGLLALQQALDRRKFAIAKNDISPNGSTPLHVAVLFGHTDIVRYLASRFPETMTITDN 143
Query: 413 FGYTSVYSSAQTSVRGHSNKQLL 345
G T ++ +A GH LL
Sbjct: 144 DGRTPLHYAATIKDNGHFYNMLL 166
>BT023123-1|AAY55539.1| 572|Drosophila melanogaster IP10857p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = -3
Query: 671 VGLGVRDHRLELVVNDL-SGTKLVSRGEDSS--GQLTCVQESRWETSDLISNTNDVLSVQ 501
VGL + ++ +N++ S + + R D++ G L +Q++ I+ + +
Sbjct: 23 VGLKSPEPEIQAFLNNVPSYMEKIHRVHDAARDGGLLALQQALDRRKFAIAKNDISPNGS 82
Query: 500 SLQDTARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 345
+ A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 83 TPLHVAVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
>BT023067-1|AAY55483.1| 572|Drosophila melanogaster IP10957p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = -3
Query: 671 VGLGVRDHRLELVVNDL-SGTKLVSRGEDSS--GQLTCVQESRWETSDLISNTNDVLSVQ 501
VGL + ++ +N++ S + + R D++ G L +Q++ I+ + +
Sbjct: 23 VGLKSPEPEIQAFLNNVPSYMEKIHRVHDAARDGGLLALQQALDRRKFAIAKNDISPNGS 82
Query: 500 SLQDTARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 345
+ A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 83 TPLHVAVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
>BT022975-1|AAY55391.1| 572|Drosophila melanogaster IP11157p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = -3
Query: 671 VGLGVRDHRLELVVNDL-SGTKLVSRGEDSS--GQLTCVQESRWETSDLISNTNDVLSVQ 501
VGL + ++ +N++ S + + R D++ G L +Q++ I+ + +
Sbjct: 23 VGLKSPEPEIQAFLNNVPSYMEKIHRVHDAARDGGLLALQQALDRRKFAIAKNDISPNGS 82
Query: 500 SLQDTARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 345
+ A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 83 TPLHVAVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,312,758
Number of Sequences: 53049
Number of extensions: 894758
Number of successful extensions: 2560
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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