Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3o13
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L77213-1|AAC37593.1| 192|Homo sapiens phosphomevalonate kinase ... 157 5e-38
CR541998-1|CAG46795.1| 192|Homo sapiens PMVK protein. 157 5e-38
BC007694-1|AAH07694.1| 192|Homo sapiens phosphomevalonate kinas... 157 5e-38
BC006089-1|AAH06089.1| 192|Homo sapiens phosphomevalonate kinas... 157 5e-38
AL451085-1|CAI13237.1| 192|Homo sapiens phosphomevalonate kinas... 157 5e-38
BT019976-1|AAV38779.1| 192|Homo sapiens phosphomevalonate kinas... 156 9e-38
AF026069-1|AAC60791.1| 160|Homo sapiens phosphomevalonate kinas... 124 4e-28
>L77213-1|AAC37593.1| 192|Homo sapiens phosphomevalonate kinase
protein.
Length = 192
Score = 157 bits (380), Expect = 5e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>CR541998-1|CAG46795.1| 192|Homo sapiens PMVK protein.
Length = 192
Score = 157 bits (380), Expect = 5e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>BC007694-1|AAH07694.1| 192|Homo sapiens phosphomevalonate kinase
protein.
Length = 192
Score = 157 bits (380), Expect = 5e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>BC006089-1|AAH06089.1| 192|Homo sapiens phosphomevalonate kinase
protein.
Length = 192
Score = 157 bits (380), Expect = 5e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>AL451085-1|CAI13237.1| 192|Homo sapiens phosphomevalonate kinase
protein.
Length = 192
Score = 157 bits (380), Expect = 5e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>BT019976-1|AAV38779.1| 192|Homo sapiens phosphomevalonate kinase
protein.
Length = 192
Score = 156 bits (378), Expect = 9e-38
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 54 SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 230
+P+++LLFSGKRKSGKDF+T+ L+ L AD C ++++S P+K +A
Sbjct: 7 APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66
Query: 231 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 410
YKE +R +MI+W EE R D G FC+ E + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67 TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAM 125
Query: 411 IRTVRITADDRTRKERGFQFQVGVDDATSECXXXXXXXXXXXXXXGEGRDSLEEQLDSIL 590
+TVR+ A +++R++RG+ F GVDDA SEC LEEQL++++
Sbjct: 126 TQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQLENLI 185
Query: 591 KLV 599
+ +
Sbjct: 186 EFI 188
>AF026069-1|AAC60791.1| 160|Homo sapiens phosphomevalonate kinase
protein.
Length = 160
Score = 124 bits (299), Expect = 4e-28
Identities = 57/155 (36%), Positives = 89/155 (57%)
Frame = +3
Query: 135 ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQYRLEMIKWSEEMRNKDYGCFCKA 314
AD C ++++S P+K +A YKE +R +MI+W EE R D G FC+
Sbjct: 3 ADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTSTYKEAFRKDMIRWGEEKRQADPGFFCRK 62
Query: 315 ACENAAIKPVWIVSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDDAT 494
E + +P+W+VSD RR +DI+WF+E YG + +TVR+ A +++R++RG+ F GVDDA
Sbjct: 63 IVEGIS-QPIWLVSDTRRVSDIQWFREAYGAVTQTVRVVALEQSRQQRGWVFTPGVDDAE 121
Query: 495 SECXXXXXXXXXXXXXXGEGRDSLEEQLDSILKLV 599
SEC LEEQL+++++ +
Sbjct: 122 SECGLDNFGDFDWVIENHGVEQRLEEQLENLIEFI 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,343,026
Number of Sequences: 237096
Number of extensions: 1699662
Number of successful extensions: 2475
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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