Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3o13
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74031-14|CAD66220.1|  187|Caenorhabditis elegans Hypothetical p...   125   3e-29
AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine re...    31   0.68 
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    30   2.1  
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z71258-5|CAA95784.2|  452|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z74031-14|CAD66220.1|  187|Caenorhabditis elegans Hypothetical
           protein F32D8.13 protein.
          Length = 187

 Score =  125 bits (302), Expect = 3e-29
 Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
 Frame = +3

Query: 63  IILLFSGKRKSGKDFLTDHLRHILADK---CEIIKISQPIKTHWAXXXXXXXXXXXSEGE 233
           I++  SGKRKSGKD+ T+ +R +L  K     +  IS  +K  +A           ++G 
Sbjct: 3   IVIAISGKRKSGKDYCTNLIREVLVQKRFDVSVAGISHSLKMEFAKKHGLKYEELLTDGP 62

Query: 234 YKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDII 413
           YKE YR +MI+W EE R KD G FC+AA  +     + I+SD RR+TD  +F   Y  + 
Sbjct: 63  YKELYRKDMIQWGEEARCKDSGLFCRAAISSTMDSDIVIISDCRRRTDYEYFSANYRTV- 121

Query: 414 RTVRITADDRTRKERGFQFQVGVDDATSEC 503
            T+RI   +  RK+RG+QF  GVDDA SEC
Sbjct: 122 -TIRIETSEEDRKQRGYQFVEGVDDAESEC 150


>AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein63 protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 281 HFLTPFYHLQSVLFLIFTLTEQFVQIQIFLFSPMSLDRLRYFNY-FTLIC 135
           H+L  +YH+  V+ LIF   + F  I + LF    +D  RYF   F L C
Sbjct: 10  HWLITYYHVIGVISLIF---DSF-SIYLILFKSSKIDNFRYFLLNFQLAC 55


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -1

Query: 326 IFTSCFTKASIIFVSHFLTPFYHLQSVLFLIFTLTEQFVQIQIFLFSPMSLDRLRYFNYF 147
           IF  CF+   I ++ H L   +H+  +LFL+  +      I  FLF  +     +Y  +F
Sbjct: 99  IFIYCFSFFIIFYILHVLQQTFHV--ILFLL-AILNSLKYIFSFLFLNIQSSVHKYLPHF 155

Query: 146 TL 141
           TL
Sbjct: 156 TL 157


>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 33  LLIFGKMSPKIILLFSGKRKSGKDFLTDHLRHILADK 143
           LL+FGK S K I   +    + K +L +  +H+  D+
Sbjct: 747 LLVFGKFSEKYIFFITKTSVNSKKWLKNRRKHVFCDE 783


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 353 YNPHRFNGSIFTSCFTKASIIFVSHFLTPFYHLQSVLFLIFTLT 222
           Y P++F  SIF  C +   + FV  FL  FY  +  LF +  L+
Sbjct: 40  YKPNKFISSIFVCCNSFLLLNFVESFL--FYKKEIRLFFLNNLS 81


>Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical
           protein ZK262.8 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 311 FTKASIIFVSHFLTPFYHLQSVLFLIF 231
           F   + +FV HFLTPF    S LF+IF
Sbjct: 10  FLGLAYVFV-HFLTPFDDFPSFLFVIF 35


>Z71258-5|CAA95784.2|  452|Caenorhabditis elegans Hypothetical
           protein C01H6.6 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = -1

Query: 326 IFTSCFTKASIIFVSHFLTPFYHLQSVLF--LIFT-LTEQFVQI---QIFLFSPMSL-DR 168
           IF +CF   SI  + ++   FY     +F  LI T L   F +I    IF  + +++  R
Sbjct: 162 IFGNCFCNISITLLMNYFAEFYGFGGFIFVELISTALLLIFTEILPSLIFTKNALAIASR 221

Query: 167 LRYFNYFTL 141
           L+YF  FT+
Sbjct: 222 LQYFVIFTM 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,151,558
Number of Sequences: 27780
Number of extensions: 278677
Number of successful extensions: 609
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)