Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3o02
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p pro...   144   1e-34
AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteaso...   144   1e-34
AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA...   144   1e-34
AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB...    30   4.1  

>AY052008-1|AAK93432.1|  389|Drosophila melanogaster LD47143p
           protein.
          Length = 389

 Score =  144 bits (349), Expect = 1e-34
 Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
 Frame = +1

Query: 184 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWTFDQKLYD 363
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGWT D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 364 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 513
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 514 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVDKGGDWRSRNKLKAYEAIYCL 693
           T++   RLD +F L R+  F+  +   + + I+KA  L+++GGDW  RN+LK Y+ +Y +
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSV 189

Query: 694 AVRDYSHAAELFIDCVSXFESYELVDF 774
           AVRD+  AA  F+D VS F SYEL+D+
Sbjct: 190 AVRDFKAAATFFLDTVSTFTSYELMDY 216


>AF145308-1|AAF08389.1|  389|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p42A protein.
          Length = 389

 Score =  144 bits (349), Expect = 1e-34
 Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
 Frame = +1

Query: 184 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWTFDQKLYD 363
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGWT D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 364 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 513
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 514 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVDKGGDWRSRNKLKAYEAIYCL 693
           T++   RLD +F L R+  F+  +   + + I+KA  L+++GGDW  RN+LK Y+ +Y +
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSV 189

Query: 694 AVRDYSHAAELFIDCVSXFESYELVDF 774
           AVRD+  AA  F+D VS F SYEL+D+
Sbjct: 190 AVRDFKAAATFFLDTVSTFTSYELMDY 216


>AE014297-3158|AAF56000.1|  389|Drosophila melanogaster CG5378-PA
           protein.
          Length = 389

 Score =  144 bits (349), Expect = 1e-34
 Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
 Frame = +1

Query: 184 KTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPYYKEVCNDLGWTFDQKLYD 363
           K P  + LA  KF L+L E+K +  LK +LL  I+  +MAP+Y+ +C++LGWT D+ L  
Sbjct: 13  KNPN-LELAQTKFLLTLAEYKQDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLA 71

Query: 364 DMTKENQDRLSKFEE--DDSETPVWQ--------DRLDYLCSVGDKETATALATSKYEDS 513
            M + N+  + + +   +D+E  + +         + +YLC +GDK  A       YE  
Sbjct: 72  RMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE-K 130

Query: 514 TLTTNRRLDAIFALFRIAYFHGCNVKEMGKAINKAHELVDKGGDWRSRNKLKAYEAIYCL 693
           T++   RLD +F L R+  F+  +   + + I+KA  L+++GGDW  RN+LK Y+ +Y +
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFY-LDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSV 189

Query: 694 AVRDYSHAAELFIDCVSXFESYELVDF 774
           AVRD+  AA  F+D VS F SYEL+D+
Sbjct: 190 AVRDFKAAATFFLDTVSTFTSYELMDY 216


>AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB,
           isoform B protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -3

Query: 469 CLQLNTSNQAYLAKRVFQSRLLQI*IACLDFLLSCHHTTSGQKSSQGHCTPLYNKEP 299
           C+   T  Q Y+ + VF      + I CL+ L     +    K +QG+CTP+ +  P
Sbjct: 38  CMDTLTGRQLYIGE-VFTREDQCVRIQCLETLQLWEDSCQVPKLTQGNCTPVPSTNP 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,334,117
Number of Sequences: 53049
Number of extensions: 585984
Number of successful extensions: 1653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)