Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3n18
(713 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 42 1e-04
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 33 0.054
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 31 0.12
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 31 0.16
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 30 0.29
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.66
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.66
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.66
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 29 0.87
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 1.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.5
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 1.5
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 2.0
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 2.7
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 2.7
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 2.7
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 27 2.7
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 3.5
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 26 4.7
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 6.1
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 26 6.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.1
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 435 EISRLESELEIRHNKEIMEAKLSSEH-NLEPMVDETRVIKTKVSKAQRRRDKKSEQ-EKI 608
E++ E E E ++++ E K+SS LE + E +++ K+ K + + SE+ E++
Sbjct: 361 EMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLLKEEHKHHSTSEKLEEL 420
Query: 609 REEEIKLQDKENVHGARNIEIQTITKRLEEKN 704
+ +QDKE +G +E+Q ++LE +N
Sbjct: 421 SKYVASIQDKERNNGQNALELQARIQQLERRN 452
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 32.7 bits (71), Expect = 0.054
Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 282 ENNKMETEKEAEDVNSMEIRQRKEKK-------ELQAQIQXXXXXXXXXXXXXXXXXXEI 440
E NK + E+E + + E ++ K+K+ E Q + E
Sbjct: 578 EENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEA 637
Query: 441 SRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEE 620
+ E ++ +E + +L + E + R K K + + R+K + ++++REEE
Sbjct: 638 RKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEE 697
Query: 621 IK 626
K
Sbjct: 698 EK 699
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 489 EAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENV 647
+AKL E E + R +K K+ + +++RDKK + + +EEE + ++ E +
Sbjct: 569 QAKLLEEIEEENKRKQERELK-KIREKEKKRDKKKQLKLAKEEERQRREAERL 620
Score = 27.1 bits (57), Expect = 2.7
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 5/149 (3%)
Frame = +3
Query: 282 ENNKMETEKEAEDVNSMEIRQRKEKKELQAQ-----IQXXXXXXXXXXXXXXXXXXEISR 446
E K +K+ + E RQR+E + L Q ++ E +
Sbjct: 593 EKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEK 652
Query: 447 LESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIK 626
+ ELE R +E + + E L+ E + K+++ QR R E+EK EE K
Sbjct: 653 KQQELE-RQKREEKQKQKEREKKLKKQQQEAD--REKMAREQRLR---EEEEKRILEERK 706
Query: 627 LQDKENVHGARNIEIQTITKRLEEKNLKI 713
++K + + + K EEK ++
Sbjct: 707 RREKLDKEEEERRRRELLEKESEEKERRL 735
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 31.5 bits (68), Expect = 0.12
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = -2
Query: 376 IWACNSF--FSLRCLISILFTSSASFSVSILLFST*REY*FYFVLKRYGYWL*FNLFHTH 203
+W SF FS+ C I+ + S+S +++ +F Y +L G + F+ F T
Sbjct: 401 LWRPFSFWLFSIFCTIAAYYLVSSSTKITVFIF-------LYLMLTFIG--IIFSTFMTS 451
Query: 202 MSVE--TTYSVNNKKEYINTVLIVHFNITTILSILFI 98
E +Y + +K +I+ V ++F+++ +++IL +
Sbjct: 452 EDAELVLSYDLMSKSLFISVVSTLNFSLSFVVAILLV 488
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 31.1 bits (67), Expect = 0.16
Identities = 30/119 (25%), Positives = 51/119 (42%)
Frame = +3
Query: 267 YSRQVENNKMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISR 446
Y R +N + EK A S +I++RK+ L +++ E+
Sbjct: 27 YQRVKQNIVEKREKHALSTTSTKIKKRKDA--LSKKVKQGIKVNKGKLSFGEDE--ELEN 82
Query: 447 LESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEI 623
+ L+ K M S++ + P D R I+ +A+ R+ EQE+IRE+EI
Sbjct: 83 DDLPLKKVEKKMFMGKDPSADTSFLP--DAEREIRENAKRAEYRKQWLKEQEQIREKEI 139
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 30.3 bits (65), Expect = 0.29
Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +3
Query: 450 ESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIK- 626
E E + + +++ E SEH + E + +VS+ ++ D + + ++EEI+
Sbjct: 163 EDEKKKKEIQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLDSLEKLCERKDEEIRS 222
Query: 627 -------LQDKENVHGARNIEIQTITKRLEEK 701
L+++ + A+N+++QT RL+ +
Sbjct: 223 SQAFNMTLREENDTLAAQNLDLQTQLDRLQRE 254
Score = 25.4 bits (53), Expect = 8.1
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +3
Query: 438 ISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREE 617
IS LE E E K ME + + + + T+ S + + ++ E++K +
Sbjct: 115 ISILEKEKEDLQRK--MEELTVESMEVVRLTRQVETLSTQYSIQRSQWVREDEKKKKEIQ 172
Query: 618 EIKLQDKENVHGARNIE 668
++K +++ HGA+N E
Sbjct: 173 DLKELYEKSEHGAKNWE 189
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +3
Query: 492 AKLSSEHNL-----EPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGA 656
A L + HN P T+ ++ + ++++RR + EQ + + E+K++ ++ G
Sbjct: 606 AALYTNHNFALDPTNPHFKRTKTVEKIMDESRKRRSNQLEQTQDGKPELKIKKRKAEKGD 665
Query: 657 RNIEIQTITKRLE 695
+ E+ I K ++
Sbjct: 666 QRQELDRIVKSIK 678
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.1 bits (62), Expect = 0.66
Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Frame = +3
Query: 162 SFLLLTE*VVSTDMCV*NKLNYSQYP*RFNTK*N*YSRQVENNKMETEKEAEDVNSMEIR 341
S L + V T++ V K S P N++ + E + +D + I+
Sbjct: 475 SALKIVNPVTHTEVVVPQKNASSPNPSETNSRAETPTAAPPQISEEEASQRKDAIKLAIQ 534
Query: 342 QR-KEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIRHNKEIMEAKLSSEHNL 518
QR +EK E +A+ + E ++ E+E + + E +AK +E
Sbjct: 535 QRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAE-EKAKREAEEKA 593
Query: 519 EPMVDET--RVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRL 692
+ +E R + K + + K+ +EK + E + +E A+ + +
Sbjct: 594 KREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREA 653
Query: 693 EEK 701
EEK
Sbjct: 654 EEK 656
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 0.66
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +3
Query: 435 EISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIRE 614
EI+RL S+LE K+ E + +E KTK + + + ++KS++ K E
Sbjct: 1569 EIARLRSQLE--STKQYYEKEKETEILAARSELVAEKEKTK-EELENQLNEKSQRIKELE 1625
Query: 615 EEIKLQDKENVHGARNIEIQTITKRLEEK 701
E+ + EN H NI+ I +++EEK
Sbjct: 1626 EQAQKNSSENTHD--NID-DMIKQQVEEK 1651
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 0.87
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 549 KTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKN 704
KT+ +K + + KK+ +EKI + + + K +VH + ++K LE +N
Sbjct: 91 KTEKAKVKPKAKKKNSKEKISKSSKQDEHKTDVH---KESVSKLSKNLESRN 139
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 549 KTKVSKAQRRRDKKSEQEKIREEEIKLQDK 638
K K S +++R+ S++E+ ++++IKL+DK
Sbjct: 206 KDKESSSKKRKSGSSDKEEKKKKKIKLKDK 235
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 465 IRHNKEIMEAKLSSEHN-LEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKE 641
+R+ E ++ L +++ + + E + ++ S+ Q + SEQ I +++I+ E
Sbjct: 96 LRNENESLKTNLENQNKRFDALTTENQSLRRANSELQEQSKIASEQLSIAKDQIEALQNE 155
Query: 642 NVHGARNIE 668
N H ++
Sbjct: 156 NSHLGEQVQ 164
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/121 (16%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 279 VENNKMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESE 458
++N +KE + V+ + +++RK++KEL++ ++R +
Sbjct: 74 MQNEIDRLKKEGDKVSILLMQERKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQ-- 131
Query: 459 LEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDK-KSEQEKIREEEIKLQD 635
R KE + + E + +++E + +K ++ + + ++ SE E+ +++ L++
Sbjct: 132 ---RAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEE 188
Query: 636 K 638
+
Sbjct: 189 E 189
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/85 (20%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +3
Query: 465 IRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVS---KAQRRRDKKSEQEKIREEEIKLQD 635
+ ++++E+KL + LE + R++ + + ++ R ++++ ++EK + ++
Sbjct: 433 LEEERDVLESKLQT---LEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKN 489
Query: 636 KENVHGARNIEIQTITKRLEEKNLK 710
+ NI +Q +TK LE +K
Sbjct: 490 SDKALAETNIRLQEVTKELETLRMK 514
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +3
Query: 564 KAQRRRDKKSEQEKIREEE----IKLQDKENVHGARNIEIQTITKRLEEKNLKI 713
K ++ R ++ +++K+RE+E K+++ E + R I +Q +R EE++ K+
Sbjct: 99 KREKERQQREQEKKLREQEKIAAKKMKELEKLEKER-IRLQEQQRRKEERDQKL 151
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 564 KAQRRRDKKSEQEKIREEEIKLQDKENVH----GARNIEIQTITKRLEEKNLKI 713
K ++ + S+ E ++ EE KLQ+K N H N + T+ K +EK + I
Sbjct: 632 KEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPI 685
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.7
Identities = 26/139 (18%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Frame = +3
Query: 291 KMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIR 470
+ E+ +D+ + ++R R E+ QA+ + ++ + EL
Sbjct: 251 RFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQNVKTSEIPINAADLEGINPEL--- 307
Query: 471 HNKEIMEAKLSSEHNLEPMVD-ETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENV 647
++E ++ S + M E + K + + + +K EQEK+R++ LQ+ +
Sbjct: 308 --LPVIEEEIRSFRDQSAMKKREKQRSKDEYASLYKEYTRK-EQEKLRKQNDDLQNLLSK 364
Query: 648 HGARNIEIQTITKRLEEKN 704
H I + T+ L ++
Sbjct: 365 HRISRIPMSTVNAFLRAED 383
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +3
Query: 576 RRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKN 704
+ DKK +E ++E+ Q++EN +N +++ ++ L+ +N
Sbjct: 27 KNDKKIAEELPQDEDDYEQEEENEDADQNTSVESESEELDNEN 69
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 480 EIMEAKLSS-EHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGA 656
E +E ++S NL+ + R +K + K++++ + S+ E + EEI KE H A
Sbjct: 545 EELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKNEDLSKLEVEKVEEIANLKKELTHLA 604
Query: 657 RNIE 668
+ E
Sbjct: 605 KQQE 608
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 546 IKTKVSKAQRRRDKKSEQEKIREE--------EIKLQDKENVHGARNIEIQTITKRLEEK 701
++T + R D +S EK+R E+KLQ KE RN+E + K+ ++
Sbjct: 71 VETSRIEVHRALDYRSANEKLRPYSKYASKNIELKLQKKEKEEELRNLE-EEKAKKKKDA 129
Query: 702 NLK 710
NLK
Sbjct: 130 NLK 132
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 267 YSRQVENNKMETEKEAEDVNSMEIRQRKEK 356
+ R ++ T KEA D+N +++RK+K
Sbjct: 375 HGRLLKVTSAVTRKEASDINQKSLQERKQK 404
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/117 (18%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +3
Query: 297 ETEKEAEDVNSMEIRQRKEKKELQAQI-QXXXXXXXXXXXXXXXXXXEISRLESELEIRH 473
+ +++++ + + +QR+E KELQ++I +IS++E++L +H
Sbjct: 17 QQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKH 76
Query: 474 NKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKEN 644
E + E E ++ ++ T + + + + +E+ ++ L KEN
Sbjct: 77 ATERQKLDKGDEETNETQQED--LLNTLLQQMEDTKITTAEKSSVQS---SLNTKEN 128
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Frame = +3
Query: 453 SELE-IRHNKEIMEAKLSSEH-NLEPMVDETRVIKTKVSKAQRRRDK----KSEQEKIRE 614
SELE ++ +E KLSS + N+E + +E +++K+ + + RDK + E EKI+
Sbjct: 244 SELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYRFEEYRDKVATLELENEKIQT 303
Query: 615 E 617
E
Sbjct: 304 E 304
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 510 HNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKR 689
+ +E + D+ R+ K+ K R+K K E+ ++ + +E N+E +
Sbjct: 881 NEIELLHDQIRITNAKLEK----REKLINASKYIEDTLRSEIQEAAEKVSNLEFSNFNLK 936
Query: 690 LEEKNLKI 713
E N+++
Sbjct: 937 EENSNMQL 944
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 6.1
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Frame = +3
Query: 462 EIRHNKEIMEAKLSSEHNLEPMVDETRVIKT----KVSKAQRRRDK-----KSEQEKIRE 614
E++ KE++ + E +V + R K K R ++ K E EK+ +
Sbjct: 547 ELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTD 606
Query: 615 EEIKLQDKENVHGARNIEIQTITKRLEEKNLK 710
E +L ++ N E+Q + LEE+N K
Sbjct: 607 EITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,028,420
Number of Sequences: 5004
Number of extensions: 33339
Number of successful extensions: 154
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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