Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3n18
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1178 + 31508349-31508461,31510074-31510932 48 6e-06
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 37 0.014
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 34 0.097
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 33 0.17
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 33 0.17
04_01_0290 + 3843610-3843712,3844088-3846003 32 0.39
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 32 0.52
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 32 0.52
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 31 0.69
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 31 0.69
01_05_0736 - 24760576-24760690,24760885-24761108,24761188-247612... 31 0.69
08_01_0397 - 3509186-3510291,3510322-3512335 31 0.91
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 31 0.91
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377... 31 1.2
06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368... 30 1.6
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 30 1.6
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 30 2.1
02_02_0445 - 10351483-10351606,10351987-10353170 29 2.8
01_01_0473 - 3478660-3480338,3480507-3480609 29 2.8
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 29 3.7
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 3.7
03_05_0020 + 19873173-19873949 29 3.7
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042... 29 3.7
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 29 4.8
11_06_0003 - 19155407-19155953,19156114-19156148 28 6.4
11_01_0701 - 5774234-5774404,5774456-5774456,5774558-5774763,577... 28 6.4
04_04_1212 - 31786063-31786195,31786275-31786398,31786486-317865... 28 6.4
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 28 6.4
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 28 8.5
>04_04_1178 + 31508349-31508461,31510074-31510932
Length = 323
Score = 48.4 bits (110), Expect = 6e-06
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Frame = +3
Query: 303 EKEAEDVNSMEIRQRKEKKELQ-----AQIQXXXXXXXXXXXXXXXXXXEISRLESELEI 467
E + E + + R RKEK +LQ + EISRL +ELE
Sbjct: 24 ESQQETLEEVLSRHRKEKSKLQDKETSLKKAAAKGSKAEQKAKKKQVEEEISRLSAELEA 83
Query: 468 RHNKEIM----EAKLSSEH-NLEPMVDETRVIKT-------KVSKAQRRRDKKSEQEKIR 611
+H E+ ++ SSE N++ +V + K SK RRR+KK+++E R
Sbjct: 84 KHAAELATFGYKSSGSSEKGNMDTLVKAIAGVSVTSNADSAKPSKGARRREKKAKEEAAR 143
Query: 612 EEEIKLQDKENVHGARNIEIQTITKRLEEKNLKI 713
E+ I+ +++ N+ R IE + + K+LE L I
Sbjct: 144 EQRIQ-EEQNNLVSDRMIENEKLEKKLEPMGLTI 176
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 435 EISRLESELE-IRHNKEIMEAK-LSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKI 608
++ R + +L+ ++ KE +E+K + E + + E R K + +KK+++ K
Sbjct: 82 KMDRYKKDLQNMKKQKEAVESKQIKQEEGYKLLQQEQRKWKRDKENLNSKLEKKTKETKD 141
Query: 609 REEEIKLQDKENVHGARNIEI-QTITKRLEEKNLKI 713
+EE+K+ +E + +E + KRL+E+N K+
Sbjct: 142 AKEELKITKREKEYLNTKLETKREENKRLDEENKKL 177
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 34.3 bits (75), Expect = 0.097
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +3
Query: 303 EKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIRHN-- 476
+ + DV+ ++ +E+K L ++Q E+S++E L +
Sbjct: 537 DNASRDVHCLKGESSEEEKGLHEKLQKALSDLDEAYSAVSERESELSQIEINLHKQKQAM 596
Query: 477 KEIMEAKLSSEHNLEPMVDETRVIKTK-VSKAQRRRDKKSEQEKI 608
+ + E KLS E+ L+ +DE V+K ++ + + + E+EK+
Sbjct: 597 EHLEELKLSMENELKGYMDENNVLKRDLIATTEIEKSLREEKEKL 641
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 444 RLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEI 623
+L E E E E KL+ E PM ET +K K ++ + + E+E +EE +
Sbjct: 334 KLAEETETASMAETAEVKLAEETETIPMA-ETAEVKLAEEKVMKKNEFEHEEENSKEEYV 392
Query: 624 K 626
K
Sbjct: 393 K 393
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 444 RLESELEIRHNKEIMEAKLSSEHNLEPMVDETR-----VIKTKVSKAQRRRDKKSEQEK- 605
RL+S + R + +E +L ++ P + E + K V+ A + +++ E+EK
Sbjct: 66 RLQSVVHQREELQRLEMELRAQVIAHPQIIEAQRSFEAAAKEHVTAAAKLKEQLHEREKY 125
Query: 606 IREEEIKLQDKENVHGARNIEIQTI 680
I E E+KL DK+ A I+ QT+
Sbjct: 126 ILELEMKLDDKDRELDALKIDHQTV 150
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 32.3 bits (70), Expect = 0.39
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Frame = +3
Query: 282 ENNKMETEKEAEDVNSMEIRQRKEKKE--LQAQIQXXXXXXXXXXXXXXXXXXEISRLES 455
E K+E + E I KE+ E L+ + E+ +L+
Sbjct: 69 EKGKLEKQLEETKAAVQAISSEKEEVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQK 128
Query: 456 ELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDK-KSEQEKIREEEIKLQ 632
EL + + AK + + M++ +K+++ + Q D KSE +K+R E + +
Sbjct: 129 ELVALAEVKEVAAKAFDDEKAKMMMESVD-LKSRLEEIQGNMDMIKSENDKLRSEALVAE 187
Query: 633 DKENVHGARNIEIQTITKRLEEKN 704
K N+ A ++ L E N
Sbjct: 188 QKLNICEAEIERLKMELGALTEAN 211
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 504 SEHNLEPMVDETRVIKTKVSKAQRRRDKK-SEQEKIREEEIKLQDKENVHGA 656
SE + M++E + + + +RRR K+ EQ+++ EEE K +++E GA
Sbjct: 15 SERRRQKMIEEEKKRLDEEMELRRRRVKEWQEQKRLEEEEAKRREQEAAAGA 66
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 525 MVDETRVIKTKVSKAQRRRDKKSEQEKIR-EEEIKLQDKENVHGARNIEIQTITKRLEEK 701
M +E V+ +++RRR K E+EK R +EE++L+ R ++ KRLEE+
Sbjct: 1 MEEEEVVVVVDEEESERRRQKMIEEEKKRLDEEMELR-------RRRVKEWQEQKRLEEE 53
Query: 702 NLK 710
K
Sbjct: 54 EAK 56
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 456 ELEIRHNKEIMEAKLSSEHN--LEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKL 629
E + +H++E+ AK H + +++ ++ K + RR +++++E+ +EEE L
Sbjct: 428 ERKRKHSEEVKIAKEVEAHEKRIRKELEKQDMLNRKREEQVRREMERNDRERRKEEERLL 487
Query: 630 QDKENVHGARNIEIQTITKRLEEKNLK 710
++K+ E + KR+E+ LK
Sbjct: 488 REKQKEEERFQREQRREHKRMEKYLLK 514
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 31.5 bits (68), Expect = 0.69
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Frame = +3
Query: 276 QVENNKMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLES 455
+V++ E E++ + NS +++ K+ KE +A + ++
Sbjct: 382 EVDHLTSEMERQQKLKNSEKMQLEKKLKESEASLNDLKVTSNMQIENMAMEKRQLESTIK 441
Query: 456 ELEIRHNKEIMEAKLSSEH--NLEPMVDETRVIKTK-VSKAQRRRDK-KSEQEKIREEEI 623
L + KE + + SE +LE +DE + + + +S D KS ++KIRE
Sbjct: 442 RLMLDLEKEKGKNNILSEQIIHLETSLDENKQKQLENISNTNILADTTKSHEKKIRELLK 501
Query: 624 KLQDKENVHGARNIEIQTITKRLEE 698
+L+D+ + + N + + ++L +
Sbjct: 502 QLEDERSRSASMNDHLNVLQQQLSD 526
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 531 DETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEK 701
+E R K + K + RR + EQ + EEE + + K+ HG R + + +K K
Sbjct: 19 EEERERKKRRDKKESRRSSRDEQAEEEEEEERRRRKKKKHGDRGKDKERDSKEKHSK 75
>01_05_0736 -
24760576-24760690,24760885-24761108,24761188-24761248,
24761909-24763992
Length = 827
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 498 LSSEHNLEPMVDETRVIKTK-VSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQ 674
L+ EH + DE ++ + V K + +K+SE + + L+D N A ++
Sbjct: 520 LNKEHEQKSKEDENSGLEGENVKKGFDKNNKESENSALEDANAPLEDTRNASDAASLSEI 579
Query: 675 TITKRLEEKN 704
+ K+ EE+N
Sbjct: 580 SEEKKTEEEN 589
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3
Query: 468 RHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENV 647
RH+++ + SS H+ D+ R + R +++ E+ K RE E + ++KE
Sbjct: 27 RHHRDRDRERSSSRHHHREDRDDDRDRDRDRERRHREKERDREERKAREREEREKEKERE 86
Query: 648 HGARNIE 668
R E
Sbjct: 87 RARRREE 93
>03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 31.1 bits (67), Expect = 0.91
Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +3
Query: 273 RQVENNKMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLE 452
R++E+N E +A+ +++ KEL++Q+ ++ E
Sbjct: 730 RKLEDNCQNLENKAKGKEQFYKNLQEKVKELESQLDSKMHSQITSEKQQNELFGKLKEKE 789
Query: 453 SELEIRHNKEIMEAKLSSEHNLE-PMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKL 629
E+ ++I E SEH L E+ + + ++ ++ + + KI+E E+KL
Sbjct: 790 -EMCTTLQQKIAE---ESEHKLRLQQQSESEIKELELKLKEQEHHRSVAESKIKELELKL 845
Query: 630 QDKENVHGARNIEIQTITKRLEE 698
+++E+ + I + L E
Sbjct: 846 KEQEHHRSVAESKAMEIGQELLE 868
>04_01_0283 +
3768732-3768792,3769235-3769876,3769907-3770076,
3770134-3770511,3770602-3770991
Length = 546
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 498 LSSEHNLEPMVDETRVIKTKVS--KAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEI 671
L + LE ++ET+V +S K + R K E +K+R E + +DK + +EI
Sbjct: 53 LGEKGKLEQQLEETKVAVQAISSEKEEVERSLKGENDKLRLEVLTAEDKLDA-----VEI 107
Query: 672 QTITKRLE 695
+ + K L+
Sbjct: 108 EKLQKELD 115
>06_01_0510 +
3681369-3681645,3682825-3682886,3683016-3683165,
3683776-3683952,3684496-3684711,3684802-3686480,
3686602-3686667,3686753-3686822,3686909-3687547
Length = 1111
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 435 EISRLESELEIRHNKEIMEAKLSSEHNLE----PMVDETRVIKTKVSKAQRRRDKKSEQE 602
+I ++ +L I + ++ A + + NL P ET V KTK+S + R D ++ +
Sbjct: 273 KILKVPEQLFIDSDTQVQIATMVAWRNLVNAFLPQASETLVPKTKISPIESRADTNAQLK 332
Query: 603 KIR 611
KIR
Sbjct: 333 KIR 335
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 435 EISRLESELE---IRHNKEIMEAKLSSEHN-LEPMVDETRVIKTKVSKAQRRRDKKSEQE 602
E R+E E E IR KE++EAK E N + M++ R+ K + +A+ + +K E++
Sbjct: 201 EERRMEREREKERIRIGKELLEAKRIEEDNERKRMIELRRLEKEEEKRAREKIRQKLEED 260
Query: 603 K 605
K
Sbjct: 261 K 261
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 303 EKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIRHN 476
+KE +D+ + + RK++ LQ +IQ E S+LES L +HN
Sbjct: 392 QKEIDDLERVLLSNRKQEGLLQEEIQKLKDEINNLNSYIESRKSESSKLESALAKKHN 449
>02_02_0445 - 10351483-10351606,10351987-10353170
Length = 435
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +3
Query: 462 EIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKE 641
EIR + I E L+ E N+E + + + + + ++ + R+ + E + +L++KE
Sbjct: 227 EIRKEEHI-EKTLNEEANIEDVDTDDELNEAEEYESWKNREIARIKRDREERDARLKEKE 285
Query: 642 NVHGARNIEIQTITKRLEEKNLK 710
+ RN+ + + E KN K
Sbjct: 286 EIEKVRNM-TEEERREWERKNPK 307
Score = 28.7 bits (61), Expect = 4.8
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Frame = +3
Query: 288 NKMETEKEAEDVNSMEIRQR--KEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESEL 461
NK E + + EI +E + +A+++ ++ R + EL
Sbjct: 87 NKEELRADHRRIRQAEIVSTVDEENERQEAELEEEDDEEAQEERRRRIRARQLLREQEEL 146
Query: 462 EIRHNKEIMEAKLS--SEHNLEPMVDETRVIKTK-VSKAQRRRDKKSEQEKIREEEIKLQ 632
+ + I E + S SE+ + ++T + K V + +RD +E+E++ EEE +L+
Sbjct: 147 LPQEEEPIEEEEESEESEYETDSEDEQTGMAMVKPVFIPKSQRDTIAERERLEEEERQLE 206
Query: 633 D--KENVHGARNIEIQTI 680
+ K+ + AR IE + I
Sbjct: 207 ELVKKRLE-ARKIETRQI 223
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 29.5 bits (63), Expect = 2.8
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Frame = +3
Query: 348 KEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRL---ESELEIRHNKEIME---AKLSSE 509
+EK L A+IQ ++ +L +SE I K+I + A E
Sbjct: 410 QEKSSLGAEIQKLKEANASLEGKLTSTESQLQQLHAEKSEASISSEKQISDLNQAIADLE 469
Query: 510 HNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKR 689
LE + E + KV A D + EKIRE + L H E +TK
Sbjct: 470 TKLELLSSEKTTVDNKV--ASLLTDVTARDEKIREMDSHLHQLHLEHVKLIAEADAVTKA 527
Query: 690 LEEKNLKI 713
+ E ++
Sbjct: 528 VSELRARV 535
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 522 PMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGA--RNIEIQTITK 686
P++DE + K+ +R + ++QE +++ +KL ++ +G N E Q+++K
Sbjct: 446 PVIDEKPSPGSNQQKSSKRGTRDTKQESVKDNHVKLTAEQVTNGGDLANGEEQSVSK 502
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3
Query: 435 EISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIRE 614
E + ++E E +E E K +E E ++ K K + + +K E+EK ++
Sbjct: 213 EETEKDNEKEKEDKEE--ETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEK-KD 269
Query: 615 EEIKLQDKENVHGARN 662
+E KL++KE + N
Sbjct: 270 KEEKLEEKEKENEEEN 285
>03_05_0020 + 19873173-19873949
Length = 258
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 486 MEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEK 605
M L +E N+ P+V +T +++ + ++KK E+EK
Sbjct: 39 MSELLQNERNVVPIVLDTNILQACENNLGNEKEKKDEEEK 78
>01_06_0909 -
32903520-32903828,32903899-32903973,32904068-32904235,
32904508-32904565,32904638-32904879,32905145-32905216,
32905865-32905943,32906734-32907062,32907137-32907256,
32907355-32907429,32908260-32908342,32908942-32908984,
32909271-32909429,32910203-32910281,32910685-32910755,
32910847-32910946,32911023-32911229,32911348-32911442,
32912362-32912436,32912621-32912713,32913078-32913182,
32913851-32913921,32914943-32915096,32916035-32916098,
32916717-32916800,32917543-32917589,32918352-32918411,
32918521-32918592
Length = 1062
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +3
Query: 447 LESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSE---QEKIREE 617
L+ L+ K EAKL S L+ ++D TR++ + +++ R D +E EK+R+
Sbjct: 395 LKLMLKYNGGKAHAEAKLKSALQLQDLLDATRILVPR-ARSGRESDSDAEIEHAEKLRQV 453
Query: 618 EIKLQDKENVHGA-RNIEIQ 674
L++ + G R ++++
Sbjct: 454 RAVLEEGGHFSGIYRKVQLK 473
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 549 KTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEK 701
K + + +R+R+K+ E+ + +EEE K +++E E + + EEK
Sbjct: 481 KEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREKEEK 531
>11_06_0003 - 19155407-19155953,19156114-19156148
Length = 193
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 435 EISRLESELEIRHNKEIMEAKLSSEHNLEPMV---DETRVIKTKVSKAQRRRDKKSEQEK 605
EIS +ES H+ EI ++ ++ + V DE ++ + + + +++ E+E+
Sbjct: 10 EISYIESYTNWSHHGEIPSKQVPNQVTVRDEVVSRDEDFMVVAEEEEEEEEEEEEEEEEE 69
Query: 606 IREEEIKLQDKE 641
EEE + +++E
Sbjct: 70 EEEEEEEEEEEE 81
>11_01_0701 -
5774234-5774404,5774456-5774456,5774558-5774763,
5775157-5775303,5775423-5775628,5776391-5776580
Length = 306
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/63 (22%), Positives = 37/63 (58%)
Frame = +3
Query: 450 ESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKL 629
+SE I + +++ ++ + N++ + + K ++ +A++RR K+ ++ REE+ K
Sbjct: 244 KSEKPIGNERDLKDSNVKWNSNMKKL---KKARKKRLKRAEKRRLKREKKRLKREEKRKS 300
Query: 630 QDK 638
+D+
Sbjct: 301 EDQ 303
>04_04_1212 -
31786063-31786195,31786275-31786398,31786486-31786597,
31786691-31786822,31786929-31787111,31787351-31787479,
31787618-31787788,31788142-31788244,31788628-31788737,
31789158-31789265,31789337-31789512,31790082-31790352,
31790524-31790738,31791042-31792574,31792665-31792728,
31793171-31793251
Length = 1214
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/69 (20%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 471 HNKEIMEAKLS-SEHNLEP-MVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKEN 644
HN +++ + +EH+ E +V+E + +++ + R +++E+E+ +EEE + +
Sbjct: 408 HNDFVLQIESEINEHSFEDFLVEEKQRELERLAAEEAERKRQAEEERRKEEERAAMEADR 467
Query: 645 VHGARNIEI 671
+E+
Sbjct: 468 AQAKAEVEM 476
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 444 RLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEI 623
RL + L+ + E +E +L E E R + + R ++ EQEK RE E
Sbjct: 198 RLRTNLDNTNQIEDLERQLQEEREAREREREER------EREKERERQEREQEKERECEE 251
Query: 624 KLQDKENVHGARNIE 668
+ ++KE R +E
Sbjct: 252 RAREKEQDRKERELE 266
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 519 EPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIE 668
EP DE V ++K +++ E+E+ EEE ++D++ G ++++
Sbjct: 389 EPNYDEEPVDRSKHWGDLEEEEEEEEEEEEEEEEEPMEDEDMEDGMQSVD 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,379,065
Number of Sequences: 37544
Number of extensions: 164995
Number of successful extensions: 752
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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