Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3n11
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47808-6|CAA87776.1|  246|Caenorhabditis elegans Hypothetical pr...   187   7e-48
AL023853-2|CAA19559.3|  253|Caenorhabditis elegans Hypothetical ...    99   3e-21
Z77669-3|CAB01241.2|  259|Caenorhabditis elegans Hypothetical pr...    91   1e-18
Z73910-5|CAI79219.1|  124|Caenorhabditis elegans Hypothetical pr...    32   0.52 
AC006664-1|AAF39902.2|  298|Caenorhabditis elegans Serpentine re...    29   2.8  
AF024492-5|AAF98621.1|  334|Caenorhabditis elegans Serpentine re...    29   3.6  

>Z47808-6|CAA87776.1|  246|Caenorhabditis elegans Hypothetical
           protein D2013.10 protein.
          Length = 246

 Score =  187 bits (456), Expect = 7e-48
 Identities = 83/150 (55%), Positives = 110/150 (73%)
 Frame = +3

Query: 318 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 497
           Y  FP            P +LEDAKQLG VL +YK+  +  VL GV +VY+FLQ+FAIPG
Sbjct: 29  YSNFPEVSADEKVHLKYPRNLEDAKQLGRVLSKYKENNYSVVLCGVIVVYVFLQSFAIPG 88

Query: 498 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVA 677
           SIFL+ILSG+LFPFY A+VLVC CSA GA++C+ +S L G+  V + FPER A+W   ++
Sbjct: 89  SIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQKFPERIAKWQDDLS 148

Query: 678 KHKDNLLNYIVFLRVTPFLPNWFINMSAPV 767
           KH+D+ LNY++FLRVTP +PNW IN+++PV
Sbjct: 149 KHRDDFLNYMIFLRVTPIVPNWLINIASPV 178


>AL023853-2|CAA19559.3|  253|Caenorhabditis elegans Hypothetical
           protein Y71A12C.2 protein.
          Length = 253

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 48/132 (36%), Positives = 75/132 (56%)
 Frame = +3

Query: 369 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 548
           P DLE  ++L   L +Y++ +    +      Y++ QTFAIPGS F+++L+G LF     
Sbjct: 37  PRDLEGLRELSSSLTKYEESHAAYTVLLFSAAYLYKQTFAIPGSFFMNLLAGALFGTVRG 96

Query: 549 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTP 728
           + LVC  +A+GASLCF LS L    +V +F   R       V   +D L  +++  R+ P
Sbjct: 97  VALVCSLNAVGASLCFCLSALFAAPIVDRFLKSRIESLRCLVNAERDRLWFFLLSARIFP 156

Query: 729 FLPNWFINMSAP 764
           F P+W +N+S+P
Sbjct: 157 FTPHWLLNISSP 168


>Z77669-3|CAB01241.2|  259|Caenorhabditis elegans Hypothetical
           protein T07F10.4a protein.
          Length = 259

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 35/116 (30%), Positives = 69/116 (59%)
 Frame = +3

Query: 417 YKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFALVLVCCCSAIGASLCF 596
           YK+ +F  +       Y++ QTFAIPGS  L++++G ++  +   +L CC + +G++LC+
Sbjct: 55  YKEDHFGYITTLFICAYLYKQTFAIPGSFLLNVIAGVVYDLWSGFILCCCLTTLGSTLCY 114

Query: 597 FLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTPFLPNWFINMSAP 764
             S L G++ V  +F ++     + +  + + LL +++F R+ P  P+W +N+ AP
Sbjct: 115 MFSELFGREYVFYYFGQKLTYLQQKIDDNSNRLLPFLLFARMFPISPSWLLNIVAP 170


>Z73910-5|CAI79219.1|  124|Caenorhabditis elegans Hypothetical
           protein M117.6 protein.
          Length = 124

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 191 YFLMKSNFINI*NILLHVSSLCKHINYELLFNFAVCCS 78
           +FL KS FI I N+ + +++  +   Y+    ++ CCS
Sbjct: 39  FFLAKSTFILIFNVFMKLNNCFQVFRYQRFLQYSTCCS 76


>AC006664-1|AAF39902.2|  298|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 40 protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 704 IIEQIVLVFCHCL*PLCCSFWEEF 633
           I++ +V  FC  + P C S W EF
Sbjct: 212 ILDAVVTFFCQFIPPFCVSIWPEF 235


>AF024492-5|AAF98621.1|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein129 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 429 YFYEVLFGVFLVYIFLQ--TFAIPGSIFLSILSGFLFP-FYFALVLVCCCSAIGASLCFF 599
           +F+  L  + + ++ +    F +PG I L +LS    P F  A  LV C +  G S+  F
Sbjct: 56  HFWSSLLDITVCFLVIPYTIFPVPGGIPLGVLSIMSVPSFIQAFSLVVCGAFTGISILGF 115

Query: 600 LSN 608
             N
Sbjct: 116 FKN 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,255,379
Number of Sequences: 27780
Number of extensions: 258385
Number of successful extensions: 736
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)