Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3n05
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113419-1|AAM29424.1|  515|Drosophila melanogaster RE18450p pro...    95   8e-20
AE014134-3026|AAF53748.1|  515|Drosophila melanogaster CG10655-P...    95   8e-20
AY058276-1|AAL13505.1|  399|Drosophila melanogaster GH02863p pro...    69   6e-12
AE013599-207|AAM70815.1|  440|Drosophila melanogaster CG3270-PA ...    69   6e-12

>AY113419-1|AAM29424.1|  515|Drosophila melanogaster RE18450p
           protein.
          Length = 515

 Score = 95.1 bits (226), Expect = 8e-20
 Identities = 42/104 (40%), Positives = 69/104 (66%)
 Frame = +2

Query: 371 YPENTDIVXXXXXXXXAATAYWLKRRAGDGLSVVVIEKDFSYKQAQRHLQHGTLSQHFTL 550
           +  + D++        ++ AYWLK +A DGL+VVV+EKD +Y Q+   +  G L Q F+L
Sbjct: 94  FQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKDDTYAQSATRVSVGGLCQQFSL 153

Query: 551 PENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASNDYAQ 682
           PEN+ +S F+A FLR+ R+H GE++ +++ P G L+LA  ++A+
Sbjct: 154 PENIQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEEHAE 197


>AE014134-3026|AAF53748.1|  515|Drosophila melanogaster CG10655-PA
           protein.
          Length = 515

 Score = 95.1 bits (226), Expect = 8e-20
 Identities = 42/104 (40%), Positives = 69/104 (66%)
 Frame = +2

Query: 371 YPENTDIVXXXXXXXXAATAYWLKRRAGDGLSVVVIEKDFSYKQAQRHLQHGTLSQHFTL 550
           +  + D++        ++ AYWLK +A DGL+VVV+EKD +Y Q+   +  G L Q F+L
Sbjct: 94  FQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKDDTYAQSATRVSVGGLCQQFSL 153

Query: 551 PENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASNDYAQ 682
           PEN+ +S F+A FLR+ R+H GE++ +++ P G L+LA  ++A+
Sbjct: 154 PENIQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEEHAE 197


>AY058276-1|AAL13505.1|  399|Drosophila melanogaster GH02863p
           protein.
          Length = 399

 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
 Frame = +2

Query: 419 AATAYWLKRRA---GDGLSVVVIEKDFSYKQAQRHLQHGTLSQHFTLPENLFLSQFSAFF 589
           A++A+WLK RA   G  L+V+V+E+D  Y  A   L  G + Q F+L EN+ +S F   F
Sbjct: 3   ASSAFWLKSRALQLGRKLNVLVVERDAGYTSASTVLSVGGVRQQFSLAENIEMSLFGYNF 62

Query: 590 LRNIREHLGEDINVEYCPTGSLVLAS 667
           + N REHLG D+++ Y P G L+LAS
Sbjct: 63  VVNGREHLG-DVDLCYQPNGYLILAS 87


>AE013599-207|AAM70815.1|  440|Drosophila melanogaster CG3270-PA
           protein.
          Length = 440

 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
 Frame = +2

Query: 419 AATAYWLKRRA---GDGLSVVVIEKDFSYKQAQRHLQHGTLSQHFTLPENLFLSQFSAFF 589
           A++A+WLK RA   G  L+V+V+E+D  Y  A   L  G + Q F+L EN+ +S F   F
Sbjct: 44  ASSAFWLKSRALQLGRKLNVLVVERDAGYTSASTVLSVGGVRQQFSLAENIEMSLFGYNF 103

Query: 590 LRNIREHLGEDINVEYCPTGSLVLAS 667
           + N REHLG D+++ Y P G L+LAS
Sbjct: 104 VVNGREHLG-DVDLCYQPNGYLILAS 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,218,695
Number of Sequences: 53049
Number of extensions: 486007
Number of successful extensions: 980
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)