Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3m24
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p pro...   188   8e-48
AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein ( Dr...   188   8e-48
AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA ...   188   8e-48
AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p pro...   187   1e-47
AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p pro...    29   7.9  
AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap prote...    29   7.9  
AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD...    29   7.9  
AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC...    29   7.9  
AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB...    29   7.9  
AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA...    29   7.9  

>AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p
           protein.
          Length = 153

 Score =  188 bits (457), Expect = 8e-48
 Identities = 84/149 (56%), Positives = 108/149 (72%)
 Frame = +1

Query: 121 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 300
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 301 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQI 480
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  I
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 481 REDIKNSEQNLKQPSAQSLRNHSFFNKSM 567
           R DI+ ++  L +     L+   FF + +
Sbjct: 121 RGDIEQAKAFLDEADKAKLKEAPFFTEKL 149


>AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 153

 Score =  188 bits (457), Expect = 8e-48
 Identities = 84/149 (56%), Positives = 108/149 (72%)
 Frame = +1

Query: 121 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 300
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 301 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQI 480
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  I
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 481 REDIKNSEQNLKQPSAQSLRNHSFFNKSM 567
           R DI+ ++  L +     L+   FF + +
Sbjct: 121 RGDIEQAKAFLDEADKAKLKEAPFFTEKL 149


>AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA
           protein.
          Length = 153

 Score =  188 bits (457), Expect = 8e-48
 Identities = 84/149 (56%), Positives = 108/149 (72%)
 Frame = +1

Query: 121 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 300
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 301 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQI 480
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  I
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 481 REDIKNSEQNLKQPSAQSLRNHSFFNKSM 567
           R DI+ ++  L +     L+   FF + +
Sbjct: 121 RGDIEQAKAFLDEADKAKLKEAPFFTEKL 149


>AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p
           protein.
          Length = 153

 Score =  187 bits (455), Expect = 1e-47
 Identities = 83/149 (55%), Positives = 108/149 (72%)
 Frame = +1

Query: 121 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 300
           M S LP F  GE+V+GFGRGSKE+G PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKEMGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 301 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQI 480
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  I
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 481 REDIKNSEQNLKQPSAQSLRNHSFFNKSM 567
           R DI+ ++  L +     L+   FF + +
Sbjct: 121 RGDIEQAKAFLDEADKAKLKEAPFFTEKL 149


>AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 113 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 152


>AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap protein
           protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD,
           isoform D protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC,
           isoform C protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB,
           isoform B protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA,
           isoform A protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,698,592
Number of Sequences: 53049
Number of extensions: 574645
Number of successful extensions: 1534
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)