Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3m22
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   2.4  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.1  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   3.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   5.4  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   7.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.5  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 342 KGANLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQ 515
           +GA+ SR     +       R+  +Q Q+     + +  Q ++ + Q+ + +RNQQR+
Sbjct: 203 QGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQ-QQQQQQRNQQRE 259


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = +3

Query: 357 SRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGI 536
           +  +I++   +D  +RR S +I  ++ +++    Q   S  Q+  + + Q+   +  NG 
Sbjct: 264 TNHSINSIQSNDSGSRRHSAEILVSS-NNKENCIQQHPSSQQQHHNGKEQRTGKDVENGG 322

Query: 537 NRDSGVNGDKPVEDVQ 584
             D+ VNG+  +   Q
Sbjct: 323 RGDALVNGNAEIRTTQ 338


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/42 (21%), Positives = 24/42 (57%)
 Frame = +3

Query: 405 RSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
           ++ +Q  + ++  + +  Q +  + Q+   ++ QQRQ +PS+
Sbjct: 229 QNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSS 270


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +3

Query: 315 IVKAMPKKRKGANLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARD 494
           +V A+ ++R       R   ARA  + + R +S + +E     R    QLR +R+Q   D
Sbjct: 363 LVDALERQRAALAQEERN-QARAAEE-KDRIASIKEREQTEQQR----QLRAARMQAHLD 416

Query: 495 ERNQQRQLEPSNGI 536
           E   QRQ E    +
Sbjct: 417 EIEWQRQREAEEAV 430


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 402 RRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQR 512
           ++  +Q Q+     R    QLR+ R Q+   ++ QQR
Sbjct: 436 QQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQR 472


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 240 YNLSIYGYGNGRCWR 196
           Y + +Y Y N R WR
Sbjct: 205 YRMVVYDYANRRAWR 219


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +3

Query: 327  MPKKRKGANLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRL--QEARDER 500
            +P +R+G   S RT+ AR    +  +R   Q         V   + R+SR    EA   R
Sbjct: 1119 IPMRRRGLPPSPRTVRARHERRLYLQRLYRQRAREGTLPTVPHGRNRRSRSAPSEADTIR 1178

Query: 501  NQQRQLE 521
             + R+ E
Sbjct: 1179 RRMRRRE 1185


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,217
Number of Sequences: 2352
Number of extensions: 12416
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)