Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3m22
(713 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p pro... 30 2.7
AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein. 30 2.7
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD... 30 2.7
AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB... 30 2.7
AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA... 30 2.7
AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC... 30 2.7
BT016080-1|AAV36965.1| 1313|Drosophila melanogaster LP01489p pro... 29 4.7
BT016033-1|AAV36918.1| 1325|Drosophila melanogaster RE02556p pro... 29 4.7
AY375489-1|AAQ75368.1| 1210|Drosophila melanogaster loner ISO3 p... 29 4.7
AY375488-1|AAQ75367.1| 1313|Drosophila melanogaster loner ISO2 p... 29 4.7
AY375487-1|AAQ75366.1| 1325|Drosophila melanogaster loner ISO1 p... 29 4.7
AY058333-1|AAL13562.1| 1082|Drosophila melanogaster GH10594p pro... 29 4.7
AE014296-3465|ABI31265.1| 1210|Drosophila melanogaster CG32434-P... 29 4.7
AE014296-3464|AAS65082.1| 1313|Drosophila melanogaster CG32434-P... 29 4.7
AE014296-3463|AAF51675.2| 1325|Drosophila melanogaster CG32434-P... 29 4.7
>BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p protein.
Length = 2753
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1109 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1164
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1165 NIRKDIQVN 1173
>AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein.
Length = 2935
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1291 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1346
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1347 NIRKDIQVN 1355
>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
isoform D protein.
Length = 3651
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1302 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1357
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1358 NIRKDIQVN 1366
>AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB,
isoform B protein.
Length = 3090
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1302 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1357
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1358 NIRKDIQVN 1366
>AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA,
isoform A protein.
Length = 2946
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1302 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1357
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1358 NIRKDIQVN 1366
>AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC,
isoform C protein.
Length = 2947
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 351 NLSRRTIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSN 530
N+ R + R RR +E + ++R++ ++ +RLQ RD+ +QQR + +
Sbjct: 1302 NIRDEETRIRREEEERIRRENESRSKREEEARIQREEI--TRLQTLRDQVDQQRIV--TE 1357
Query: 531 GINRDSGVN 557
I +D VN
Sbjct: 1358 NIRKDIQVN 1366
>BT016080-1|AAV36965.1| 1313|Drosophila melanogaster LP01489p protein.
Length = 1313
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1058 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1111
Query: 546 SGV 554
SGV
Sbjct: 1112 SGV 1114
>BT016033-1|AAV36918.1| 1325|Drosophila melanogaster RE02556p protein.
Length = 1325
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1070 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1123
Query: 546 SGV 554
SGV
Sbjct: 1124 SGV 1126
>AY375489-1|AAQ75368.1| 1210|Drosophila melanogaster loner ISO3
protein.
Length = 1210
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 955 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1008
Query: 546 SGV 554
SGV
Sbjct: 1009 SGV 1011
>AY375488-1|AAQ75367.1| 1313|Drosophila melanogaster loner ISO2
protein.
Length = 1313
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1058 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1111
Query: 546 SGV 554
SGV
Sbjct: 1112 SGV 1114
>AY375487-1|AAQ75366.1| 1325|Drosophila melanogaster loner ISO1
protein.
Length = 1325
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1070 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1123
Query: 546 SGV 554
SGV
Sbjct: 1124 SGV 1126
>AY058333-1|AAL13562.1| 1082|Drosophila melanogaster GH10594p
protein.
Length = 1082
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 827 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 880
Query: 546 SGV 554
SGV
Sbjct: 881 SGV 883
>AE014296-3465|ABI31265.1| 1210|Drosophila melanogaster CG32434-PC,
isoform C protein.
Length = 1210
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 955 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1008
Query: 546 SGV 554
SGV
Sbjct: 1009 SGV 1011
>AE014296-3464|AAS65082.1| 1313|Drosophila melanogaster CG32434-PA,
isoform A protein.
Length = 1313
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1058 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1111
Query: 546 SGV 554
SGV
Sbjct: 1112 SGV 1114
>AE014296-3463|AAF51675.2| 1325|Drosophila melanogaster CG32434-PB,
isoform B protein.
Length = 1325
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 TIHARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEPSNGINRD 545
T +AR HD + +E ++E+ ++ M ++ R++ + + R P N NRD
Sbjct: 1070 TFNARNEHD--RCKFAEDLKESISE----MDEMESLRIEAELERQKSARNRAPGNAENRD 1123
Query: 546 SGV 554
SGV
Sbjct: 1124 SGV 1126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,443,641
Number of Sequences: 53049
Number of extensions: 460190
Number of successful extensions: 1273
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -