Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3m11
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009764-1|AAH09764.1| 212|Homo sapiens mitochondrial ribosomal... 63 8e-10
AF151876-1|AAD34113.1| 212|Homo sapiens CGI-118 protein protein. 63 8e-10
BC036501-1|AAH36501.1| 113|Homo sapiens MRPL48 protein protein. 50 1e-05
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 34 0.59
AK129856-1|BAC85243.1| 295|Homo sapiens protein ( Homo sapiens ... 34 0.59
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 34 0.59
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 34 0.59
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ... 30 9.6
AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency ... 30 9.6
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 30 9.6
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein. 30 9.6
>BC009764-1|AAH09764.1| 212|Homo sapiens mitochondrial ribosomal
protein L48 protein.
Length = 212
Score = 63.3 bits (147), Expect = 8e-10
Identities = 34/125 (27%), Positives = 64/125 (51%)
Frame = +2
Query: 314 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 493
Y LN+ L YD + E+ +H + ++VE+ +A P + ++V + + + + +
Sbjct: 88 YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147
Query: 494 YQLNIYERNVQVVDVPAWALGTLLRVSRALLPEGCTLNVHEHTPEHEEIRYVPDNQLIDL 673
L +ER VQ+ + A L + ++ LPEG L+V EHT E + R+ +L +L
Sbjct: 148 SVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEEL 207
Query: 674 KQQLE 688
+L+
Sbjct: 208 LAKLK 212
>AF151876-1|AAD34113.1| 212|Homo sapiens CGI-118 protein protein.
Length = 212
Score = 63.3 bits (147), Expect = 8e-10
Identities = 34/125 (27%), Positives = 64/125 (51%)
Frame = +2
Query: 314 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 493
Y LN+ L YD + E+ +H + ++VE+ +A P + ++V + + + + +
Sbjct: 88 YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147
Query: 494 YQLNIYERNVQVVDVPAWALGTLLRVSRALLPEGCTLNVHEHTPEHEEIRYVPDNQLIDL 673
L +ER VQ+ + A L + ++ LPEG L+V EHT E + R+ +L +L
Sbjct: 148 SVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEEL 207
Query: 674 KQQLE 688
+L+
Sbjct: 208 LAKLK 212
>BC036501-1|AAH36501.1| 113|Homo sapiens MRPL48 protein protein.
Length = 113
Score = 49.6 bits (113), Expect = 1e-05
Identities = 28/111 (25%), Positives = 56/111 (50%)
Frame = +2
Query: 356 ILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVD 535
+ E+ +H + ++VE+ +A P + ++V + + + + + L +ER VQ+
Sbjct: 3 LAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERVVQISG 62
Query: 536 VPAWALGTLLRVSRALLPEGCTLNVHEHTPEHEEIRYVPDNQLIDLKQQLE 688
A L + ++ LPEG L+V EHT E + R+ +L +L +L+
Sbjct: 63 FSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEELLAKLK 113
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 33.9 bits (74), Expect = 0.59
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 374 SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 547
S+I Y + L ED W TP LK + + EY++ IY N + + PA
Sbjct: 15288 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 15347
Query: 548 ALGTLLRVSRALLPE 592
GT R L PE
Sbjct: 15348 VPGTPKAEDRMLPPE 15362
>AK129856-1|BAC85243.1| 295|Homo sapiens protein ( Homo sapiens
cDNA FLJ26346 fis, clone HRT04038, highly similar to
Homo sapiens titin (TTN), transcript variant N2-B. ).
Length = 295
Score = 33.9 bits (74), Expect = 0.59
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 374 SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 547
S+I Y + L ED W TP LK + + EY++ IY N + + PA
Sbjct: 156 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 215
Query: 548 ALGTLLRVSRALLPE 592
GT R L PE
Sbjct: 216 VPGTPKAEDRMLPPE 230
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 33.9 bits (74), Expect = 0.59
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 374 SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 547
S+I Y + L ED W TP LK + + EY++ IY N + + PA
Sbjct: 22712 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 22771
Query: 548 ALGTLLRVSRALLPE 592
GT R L PE
Sbjct: 22772 VPGTPKAEDRMLPPE 22786
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 33.9 bits (74), Expect = 0.59
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 374 SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 547
S+I Y + L ED W TP LK + + EY++ IY N + + PA
Sbjct: 15288 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 15347
Query: 548 ALGTLLRVSRALLPE 592
GT R L PE
Sbjct: 15348 VPGTPKAEDRMLPPE 15362
>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2406
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 635 LHVQ-ECVHEHSKCIPPVKEPLIPEAEYPKPMQEHQQPEHCAH 510
LH Q + + H+ IPP P +P+ P+P Q +P AH
Sbjct: 138 LHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH 180
>AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2405
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 635 LHVQ-ECVHEHSKCIPPVKEPLIPEAEYPKPMQEHQQPEHCAH 510
LH Q + + H+ IPP P +P+ P+P Q +P AH
Sbjct: 138 LHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH 180
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 635 LHVQ-ECVHEHSKCIPPVKEPLIPEAEYPKPMQEHQQPEHCAH 510
LH Q + + H+ IPP P +P+ P+P Q +P AH
Sbjct: 138 LHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH 180
>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
Length = 2414
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 635 LHVQ-ECVHEHSKCIPPVKEPLIPEAEYPKPMQEHQQPEHCAH 510
LH Q + + H+ IPP P +P+ P+P Q +P AH
Sbjct: 147 LHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,776,199
Number of Sequences: 237096
Number of extensions: 1925100
Number of successful extensions: 4254
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4247
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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