Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3m09
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0309 - 17342900-17342904,17343860-17343887,17344003-173441... 72 4e-13
11_04_0426 - 17573681-17574010,17574163-17574282,17574382-175747... 67 1e-11
03_02_0986 - 12976344-12976679,12977962-12978081,12978414-129787... 65 7e-11
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 58 8e-09
02_02_0570 - 11591854-11592054,11593388-11593507,11594205-115945... 55 7e-08
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 54 9e-08
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 54 9e-08
05_07_0303 - 29093045-29093176,29093332-29093451,29093570-290939... 54 1e-07
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565... 53 3e-07
05_04_0372 + 20726103-20726139,20726266-20726302,20726953-207270... 50 2e-06
01_05_0639 + 23873735-23873814,23873932-23874148,23874259-238744... 48 1e-05
01_05_0637 + 23860857-23860936,23861057-23861273,23861388-238615... 47 2e-05
01_06_1559 + 38247463-38247499,38247711-38247747,38248181-382482... 46 3e-05
03_02_0956 + 12700507-12700540,12700640-12700676,12700792-127010... 43 3e-04
09_02_0106 + 4347024-4347536,4349619-4349700,4350499-4350747,435... 42 5e-04
05_02_0137 + 6996336-6996415,6998240-6998351,6999292-6999453,699... 42 7e-04
01_03_0034 + 11828889-11828897,11829465-11829484,11829697-118297... 41 0.001
09_02_0096 - 4221935-4222231 37 0.020
12_01_0501 + 3976156-3976292,3976364-3976949 34 0.14
01_06_0671 - 31076463-31076610,31077060-31077202,31077758-310779... 30 2.3
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184... 29 3.1
08_01_1036 + 10520727-10521117,10521301-10521479,10521603-105225... 28 7.1
06_01_0040 - 393818-393938,394331-394389,394595-394756,394875-39... 28 7.1
09_02_0083 + 4081564-4081677,4081853-4082359 28 9.4
>12_02_0309 -
17342900-17342904,17343860-17343887,17344003-17344122,
17344252-17344413,17344655-17344865,17344980-17345016,
17345965-17346016
Length = 204
Score = 72.1 bits (169), Expect = 4e-13
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM-IQVNMFGLALNIVYVLIYFNYT 493
IYK ST G +P++ + +L + Y I ++ + I +N G + +Y+++Y Y
Sbjct: 36 IYKSKSTEGFQSVPYVVALFSAMLWIFYALIKSNEALLITINAAGCVIETIYIVMYLAYA 95
Query: 494 QQKVKVWA-------QIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLF 652
+K KV+ +G+ G + + + E ++V G + AF + +PL
Sbjct: 96 PKKAKVFTTKILLLLNVGVFGVILLLTLLLSHGEQ-RVVS--LGWVCVAFSVSVFVAPLS 152
Query: 653 GLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+K +IQ++S E MPF + L+ T+ +W LYG++++
Sbjct: 153 IIKRVIQSRSVEYMPFSLSLTLTLSAVVWFLYGLLIK 189
>11_04_0426 -
17573681-17574010,17574163-17574282,17574382-17574754,
17575051-17575087,17575821-17575872
Length = 303
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM-IQVNMFGLALNIVYVLIYFNYT 493
IYK ST+G +P++ + +L + Y + D+ + I +N G + +Y+ +Y Y
Sbjct: 36 IYKSKSTQGFQSVPYVVALFSAMLWIYYALLKSDECLLITINSAGCVIETIYIAVYLVYA 95
Query: 494 QQKVKVWA-------QIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLF 652
+K K++ +G+ G + + D ++V G + F + +PL
Sbjct: 96 PKKAKMFTAKLLLLVNVGVFGLILLLTL-LLSAGDRRIVV--LGWVCVGFSVSVFVAPLS 152
Query: 653 GLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
++ +++ KS E MPF + S T+ +W LYG++++
Sbjct: 153 IIRLVVRTKSVEFMPFSLSFSLTISAVVWFLYGLLIK 189
>03_02_0986 -
12976344-12976679,12977962-12978081,12978414-12978786,
12978934-12978970,12979160-12979196
Length = 300
Score = 64.9 bits (151), Expect = 7e-11
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Frame = +2
Query: 248 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 427
IVG+I +F+ I + + +YK+ ST +P+ ++ +L L Y + D +
Sbjct: 11 IVGNILSFLVI---LAPVPTFYRVYKKKSTESFQSVPYAVALLSAMLWLYYALLTSDLLL 67
Query: 428 IQVNMFGLALNIVYVLIYFNYTQQKVKVWA-------QIGLAGAVSAALIGYAQTEDPKL 586
+ +N G + +Y+ +Y Y ++ + + L AV AAL + D ++
Sbjct: 68 LSINSIGCLVESLYLTVYLLYAPRQAMAFTLKLVCAMNLALFAAVVAALQLLVKATDRRV 127
Query: 587 VETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
T G I +F + +PL ++++I+ KS E MPF + T+ +W YG++++
Sbjct: 128 --TLAGGIGASFALAVFVAPLTIIRQVIRTKSVEFMPFWLSFFLTLSAVVWFFYGLLMK 184
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 58.0 bits (134), Expect = 8e-09
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDT-MIQVNMFGLALNIVYVLIYFNYT 493
+Y++ ST G +P++ + L + Y + + + ++ +N FG + Y+ +Y Y
Sbjct: 473 VYRKKSTEGFSSVPYVVALFSCTLWILYAMVKTNSSPLLTINAFGCVVEAAYIAVYLVYA 532
Query: 494 QQKVKVWAQ-----IGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGL 658
+ ++ A + +A ++ A P V G+I AF + +P+ +
Sbjct: 533 PRPARLRALTSFLLLNVAAFSLVVVVTVAAVAQPHRVRV-LGSICLAFSMAVFVAPMSVI 591
Query: 659 KEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 754
+I+ KS E MPF + T+ W YG+
Sbjct: 592 MVVIKTKSAEFMPFSLSFFLTLSAVAWFFYGL 623
>02_02_0570 -
11591854-11592054,11593388-11593507,11594205-11594583,
11594897-11594933,11595293-11595335
Length = 259
Score = 54.8 bits (126), Expect = 7e-08
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGY-ILRDDTM--IQVNMFGLALNIVYVLIYFN 487
I+K+GS +P++ ++ ++ + YG + +M I +N G+A+ + Y+ ++
Sbjct: 33 IWKKGSVEQYSAVPYVATLLNCMMWVLYGLPAVHPHSMLVITINGTGMAIELTYIALFLA 92
Query: 488 YTQQKVK------VWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPL 649
++ V+ + A++ AV+A ++ A T + + + G + F + A+PL
Sbjct: 93 FSLGAVRRRVLLLLAAEVAFVAAVAALVLNLAHTHERRSMIV--GILCVLFGTGMYAAPL 150
Query: 650 FGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
+K +IQ KS E MP + L+ V W Y +I
Sbjct: 151 SVMKMVIQTKSVEYMPLFLSLASLVNGICWTAYALI 186
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 54.4 bits (125), Expect = 9e-08
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRD-DTMIQVNMFGLALNIVYVLIYFNYT 493
+Y++ ST G P++ + +L + Y ++ + ++ +N G + VY+ +Y Y
Sbjct: 54 VYRKKSTEGFQSTPYVVTLFSCMLWMYYAFVKSGAELLVTINGVGCVIETVYLAMYLAYA 113
Query: 494 QQ-------KVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLF 652
+ K+ + IGL G ++ + ++ E L G I A + A+PL
Sbjct: 114 PKSARMLTAKMLLGLNIGLFGVIALVTLLLSRGE---LRVHVLGWICVAVSLSVFAAPLS 170
Query: 653 GLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
++ +I+ KS E MPF + + +W LYG++
Sbjct: 171 IIRLVIRTKSVEFMPFSLSFFLVLSAVIWFLYGLL 205
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 54.4 bits (125), Expect = 9e-08
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYI-LRDDTMI--QVNMFGLALNIVYVLIYFN 487
I K ST +P+L ++ ++ L YG + D ++ VN G + Y+ ++
Sbjct: 34 ILKAKSTERFDGLPYLFSLLNCLICLWYGLPWVADGRLLVATVNGIGAVFQLAYICLFIF 93
Query: 488 YTQQKVKVWAQIGLAGAVSA--ALIGYAQTE--DPKLVETRFGTIITAFMFYLIASPLFG 655
Y + IGL V AL+ +A D L + G + A + + ASPL
Sbjct: 94 YADSRKTRMKIIGLLVLVVCGFALVSHASVFFFDQPLRQQFVGAVSMASLISMFASPLAV 153
Query: 656 LKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+ +I+++S E MPF + LS +++ + LYG++LR
Sbjct: 154 MGVVIRSESVEFMPFYLSLSTFLMSASFALYGLLLR 189
>05_07_0303 -
29093045-29093176,29093332-29093451,29093570-29093985,
29094163-29094208
Length = 237
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Frame = +2
Query: 242 KEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYG--YILR 415
+ +VG I ++ G S I K+ P+L + L + YG +I
Sbjct: 9 RNVVGIIGNLISFGLFLSPLPTFVTIVKKKDVEEFVPDPYLATFLNCALWVFYGLPFIHP 68
Query: 416 DDTMI-QVNMFGLALNIVYVLIYFNYTQQKVK------VWAQIGLAGAVSAALIGYAQTE 574
+ ++ +N GL + I Y+ IYF Y + + + ++ AV+A ++ A T
Sbjct: 69 NSILVVTINGTGLLIEIAYLAIYFAYAPKPKRCRMLGVLTVELVFLAAVAAGVLLGAHTY 128
Query: 575 DPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 754
D + + GT+ F + A+PL +K++I KS E MPF + L + W +Y
Sbjct: 129 DKRSLIV--GTLCVFFGTLMYAAPLTIMKQVIATKSVEYMPFTLSLVSFINGICWTIYAF 186
Query: 755 I 757
I
Sbjct: 187 I 187
>01_05_0251 + 19952882-19955459,19956209-19956245,19956370-19956586,
19957063-19957221,19957397-19957516,19957609-19957719
Length = 1073
Score = 52.8 bits (121), Expect = 3e-07
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYG--YILRDDTMIQ-VNMFGLALNIVYVLIYFN 487
I + GST MP++ ++ ++ L YG ++ ++ VN G + Y +
Sbjct: 878 IVRNGSTEQFSAMPYIYSLLNCLICLWYGLPFVSYGVVLVATVNSIGALFQLAYTATFIA 937
Query: 488 YTQQK--VKVWAQIGLAGAVSAALIGYAQTE--DPKLVETRFGTIITAFMFYLIASPLFG 655
+ K VKV + + + V A LI Y D + + G + A + ++ ASPL
Sbjct: 938 FADAKNRVKVSSLLVMVFGVFA-LIVYVSLALFDHQTRQLFVGYLSVASLIFMFASPLSI 996
Query: 656 LKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIIL 760
+ +I+ KS E MPF + LS +++ + YG++L
Sbjct: 997 INLVIRTKSVEYMPFYLSLSMFLMSVSFFAYGVLL 1031
>05_04_0372 +
20726103-20726139,20726266-20726302,20726953-20727048,
20728343-20728625,20728862-20728981,20729072-20729284
Length = 261
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Frame = +2
Query: 311 WDIYKQGSTRGIGIMPFLGGVVMTILNLQYG--YILRDDTMIQ-VNMFGLALNIVYVLIY 481
W I ++ ST +P+ ++ +L+ YG ++ ++ ++ +N G + YV+++
Sbjct: 29 WRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSPNNILVSTINGAGAVIETAYVVVF 88
Query: 482 FNYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLV----ETRFGTIITAFMFYLIASPL 649
+ +GLA AV++ A L + G T + ASPL
Sbjct: 89 LVFASTHKTRLRTLGLAAAVASVFAAVALVSLLALHGQHRKLLCGVAATVCSICMYASPL 148
Query: 650 FGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
++ +I+ KS E MPF + L+ + W +YG++ R
Sbjct: 149 SIMRLVIKTKSVEYMPFLMSLAVFLCGTSWFIYGLLGR 186
>01_05_0639 +
23873735-23873814,23873932-23874148,23874259-23874420,
23876037-23876357
Length = 259
Score = 47.6 bits (108), Expect = 1e-05
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Frame = +2
Query: 242 KEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY-ILRD 418
+ +VG I ++ G + W I K+ P+L ++ +L + YG ++
Sbjct: 8 RNVVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPVVHP 67
Query: 419 DTMIQVNMFGLALNI--VYVLIYFNYTQQK--VKVWAQIG-----LAGAVSAALIGYAQT 571
++++ V + G+ L + Y+LI+F Y+ K +++ A +G + + L+G
Sbjct: 68 NSILVVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGVELVFMLAVILGVLLGAHTH 127
Query: 572 EDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYG 751
E ++ G + F + SPL + ++I+ KS E MPF + L + W Y
Sbjct: 128 EKRSMI---VGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGVCWTAYA 184
Query: 752 II 757
+I
Sbjct: 185 LI 186
>01_05_0637 +
23860857-23860936,23861057-23861273,23861388-23861549,
23862850-23863155
Length = 254
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Frame = +2
Query: 242 KEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY-ILRD 418
+ +VG I ++ G S W I K+ P+L ++ +L + YG I+
Sbjct: 8 RNVVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFYGIPIVHP 67
Query: 419 DTMIQVNMFGLALNI--VYVLIYFNYTQQK--VKVWAQIGLAGA-VSAALIGYA-QTEDP 580
++++ V + G+ L + Y+ I+F Y+ K +++ A +G+ + A ++G
Sbjct: 68 NSILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAVLGVELVFMLAVILGVLLSAHTH 127
Query: 581 KLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
K G + F + SPL + ++I+ KS E MPF + L + W Y +I
Sbjct: 128 KKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGVCWTAYALI 186
>01_06_1559 +
38247463-38247499,38247711-38247747,38248181-38248276,
38248671-38248788,38248844-38248878,38249173-38249452,
38249701-38249820,38250369-38250620
Length = 324
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +2
Query: 434 VNMFGLALNIVYVLIYFNYTQQK--VKVWAQIGLAGAVSAALIGYAQTEDPKLVETRF-G 604
+N G + +YV+I+ + ++K +K+ +GL ++ ++ + F G
Sbjct: 124 INGTGSVIEAIYVVIFLIFAERKARLKMMGLLGLVTSIFTMVVLVSLLALHGQGRKLFCG 183
Query: 605 TIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
T F + ASPL ++ +I+ KS E MPF + LS + W +YG++ R
Sbjct: 184 LAATIFSICMYASPLSIMRLVIKTKSVEFMPFLLSLSVFLCGTSWFIYGLLGR 236
>03_02_0956 +
12700507-12700540,12700640-12700676,12700792-12701002,
12701085-12701246,12701897-12702016,12702103-12702525
Length = 328
Score = 42.7 bits (96), Expect = 3e-04
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Frame = +2
Query: 317 IYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMI-QVNMFGLALNIVYVLIYFNYT 493
I + ST +P++ ++ T L YG +I VN G AL +YV +Y Y
Sbjct: 30 IVRSKSTEEFRWLPYVTTLLSTSLWTFYGLHKPGGLLIVTVNGSGAALEAIYVTLYLAYA 89
Query: 494 QQKVKV-WAQIGLAGAVSA--ALIGYAQTEDPKLVETRF-GTIITAFMFYLIASPLFGLK 661
++ K ++ LA V A A++ A V G + A + A+P+ ++
Sbjct: 90 PRETKAKMVKVVLAVNVGALAAVVAVALVALHGGVRLFVVGVLCAALTIGMYAAPMAAMR 149
Query: 662 EIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+++ +S E MPF + + +W +Y ++++
Sbjct: 150 TVVKTRSVEYMPFSLSFFLFLNGGVWSVYSLLVK 183
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 575 DPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 754
DP G +I+ +F ASP+ + I+++KSTE + ++ + T +W YG+
Sbjct: 3 DPSFFVGIVGNVISILVF---ASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGL 59
>09_02_0106 +
4347024-4347536,4349619-4349700,4350499-4350747,
4351594-4351646,4353064-4353159,4353289-4353423
Length = 375
Score = 41.9 bits (94), Expect = 5e-04
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Frame = +2
Query: 242 KEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY-ILRD 418
+ +VG + ++ G S + I K + P+L ++ +L + YG I+
Sbjct: 8 RNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHP 67
Query: 419 DTM--IQVNMFGLALNIVYVLIYFNYTQQK-------VKVWAQIGLAGAVSAALIGYAQT 571
+++ + +N GL + VY+ I+F ++ +K V + +A V L+G
Sbjct: 68 NSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGVLLGAHTH 127
Query: 572 EDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 697
+ L+ G + F + +SPL + ++++ KS E MP
Sbjct: 128 QRRSLI---VGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMP 166
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 578 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 754
P L+ G + F L SP+ II+NK + L+ + +W+ YG+
Sbjct: 4 PDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGL 62
>05_02_0137 +
6996336-6996415,6998240-6998351,6999292-6999453,
6999755-6999874,6999947-7000108
Length = 211
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/105 (23%), Positives = 46/105 (43%)
Frame = +2
Query: 449 LALNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMF 628
LAL ++ + ++V + A + LA + + + G++
Sbjct: 49 LALFSCLTYSWYGFPVKQVMLMASLILAVFCMTVFFSSFSIHNHHIRKVFVGSVGLVSSI 108
Query: 629 YLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+ SPL +K++I+ KS E MPF + L + W+ YG+I R
Sbjct: 109 SMYGSPLVAMKQVIRTKSVEFMPFYLSLFTLFTSLTWMAYGVIGR 153
>01_03_0034 +
11828889-11828897,11829465-11829484,11829697-11829739,
11831088-11831252,11832745-11832864,11834709-11834879
Length = 175
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/88 (32%), Positives = 46/88 (52%)
Frame = +2
Query: 500 KVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNK 679
K V IGL+GAV A+ +A ++ + G I F + ASPL + +IQ++
Sbjct: 29 KWAVGLDIGLSGAV-LAVATFAISQLQLRIRV-IGIICACFNVLMYASPLTAVINVIQHE 86
Query: 680 STEGMPFPIILSGTVVTFMWLLYGIILR 763
+ + MPF + + +WL+YGII R
Sbjct: 87 NVDAMPFWLSFFLFLNGGVWLVYGIIDR 114
>09_02_0096 - 4221935-4222231
Length = 98
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 242 KEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY-ILRD 418
+ +VG + ++ G S W I K+ + P+L ++ +L + YG I+
Sbjct: 8 RNVVGIVGNAISFGLFLSPVLTFWRIIKEKDMKYFKADPYLATLLNCMLWVFYGLPIVHP 67
Query: 419 DTM--IQVNMFGLALNIVYVLIYFNYTQQK 502
+++ + +N GL + VY+ I+F ++ +K
Sbjct: 68 NSILVVTINGIGLVIEAVYLTIFFLFSNKK 97
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 578 PKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGI 754
P L+ G + A F L SP+ II+ K + L+ + +W+ YG+
Sbjct: 4 PDLIRNVVGIVGNAISFGLFLSPVLTFWRIIKEKDMKYFKADPYLATLLNCMLWVFYGL 62
>12_01_0501 + 3976156-3976292,3976364-3976949
Length = 240
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +2
Query: 425 MIQVNMFGLALNIVYVLIYFNYTQQKVKVWAQIGLA------GAVSAALIGYAQTEDPKL 586
++ +N L + VY+ I+F ++ +K K + LA AV+ ++ A T +
Sbjct: 49 VVTINGISLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVAVGVLLGAHTHQRRS 108
Query: 587 VETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
+ G + F + +SPL + +++ KS E MP + + + W LY +I
Sbjct: 109 LIV--GILCVIFGTIMYSSPLTIM--VVKTKSVEYMPLLLSVVSFLNGLCWTLYALI 161
>01_06_0671 -
31076463-31076610,31077060-31077202,31077758-31077963,
31078119-31078644,31078753-31078854,31079572-31079637,
31079710-31079822,31080260-31080345,31081007-31081146
Length = 509
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 499 LLGVIEVYQHVDDI*GQTEHVDLNHGVVTEYVTILQVEDGHNN 371
++GV+ VYQH +D H + G E I Q++DG +N
Sbjct: 110 MIGVVHVYQHTND----GHHAIASVGTTAEIHHIKQLDDGSSN 148
>06_01_0244 -
1844161-1844241,1844356-1844394,1844510-1844617,
1844638-1844685,1845058-1845111,1845214-1845268,
1845442-1845522,1846238-1846615,1847196-1847401
Length = 349
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 DRHHAVPRRCCYDH-PQLAIWLHTP*RHHDSSQHVR 447
D AVP CC P IW+H P S H+R
Sbjct: 121 DNIDAVPSGCCLSSSPGSVIWVHKPPEGRRGSYHIR 156
>08_01_1036 +
10520727-10521117,10521301-10521479,10521603-10522593,
10522613-10522656
Length = 534
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 214 RLSGYSSTVQRDSGLDSGLRNHWADVLRQFHMLGHIQAGQH 336
RLS ST S L G N WAD+ +QFH + +G H
Sbjct: 434 RLSLSESTFTWFSSLPYGSINSWADLEKQFH--SYFYSGVH 472
>06_01_0040 -
393818-393938,394331-394389,394595-394756,394875-395085,
395174-395290,395794-395859,396020-396292,397410-397492,
398322-398327,398738-398797,399093-399137,399530-399639,
400412-400510,400599-400796,401463-401517,401571-401628,
402191-402360
Length = 630
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/92 (19%), Positives = 43/92 (46%)
Frame = +2
Query: 488 YTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEI 667
YT+ K+ + + L GA++ + + + P+L T + I + +A + + +
Sbjct: 457 YTRAKI-LGTLVCLVGAMAMSFLQSPVSSSPQLTTTSYYDWILGCFYLFLAVVVLSIYTV 515
Query: 668 IQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+Q + P P+ + +V + M ++ IL+
Sbjct: 516 LQAATLVSFPAPLTMC-SVTSMMGAVFTAILQ 546
>09_02_0083 + 4081564-4081677,4081853-4082359
Length = 206
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 602 GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
G + F + +SPL + ++++ KS E MP + + + W Y +I
Sbjct: 77 GILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLI 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,938,542
Number of Sequences: 37544
Number of extensions: 436141
Number of successful extensions: 1092
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -