Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3m09
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    29   0.12 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   4.5  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   5.9  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    24   5.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   7.8  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.8  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 436 QHVRSGLKYRLRADILQLHPAEGQGLGSDRSGRCCVSCSYRIRPDR 573
           +  R  LK  +RA   Q      Q L  D +G+C     YR++P R
Sbjct: 329 RQARHALKTAIRASKKQFFDRMLQALHDDETGQCIRKVLYRLQPSR 374


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 369 PPRNGMMPIPRVLPCLYMSQHMKLPENICPMVTKAAIEPTISL 241
           PPR GM+P     P L M  +  LP  +  M     + PT+ +
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGM 128


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 505 DLLLGVIEVYQHVDDI*GQTEHVDLNHGVVTEYVTILQVEDGHNN 371
           D  L +  V    DD+  + + V LN+ V+  Y+T L V    NN
Sbjct: 112 DFRLKIAIVAYEPDDMVKEKKMVTLNNEVIPFYLTKLNVIAKENN 156


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +2

Query: 608 IITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
           I+ A++ Y++   L G+ + +        PF   L+G + T    + G+ LR
Sbjct: 25  IVDAYLLYIL---LTGIMQFVYCCLVGTFPFNSFLAGFISTVSCFVLGVCLR 73


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 298 QFHMLGHIQAGQHSRDRHHAVPRRCCYDHP 387
           Q H   H     HS+ +H A PR  CY  P
Sbjct: 182 QHHHHHHHHHPHHSQQQHSASPR--CYPMP 209


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
 Frame = +2

Query: 338  RGIGIMPFLGGVVMTILNL-QYG---YILRDDTMI 430
            RGI ++P + G+  T+L+L Q G   ++ +D T++
Sbjct: 987  RGIHVVPTMFGIAFTVLHLNQSGALIHVYQDGTVL 1021


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 355 HDADPASAALLVYVPAYETAGEHLPNGYEGRYRAHY 248
           H +  A+AA     P Y  +   LP+   G + A++
Sbjct: 25  HQSAAAAAAAAANAPVYVPSSRALPHSQYGAHSANF 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,826
Number of Sequences: 2352
Number of extensions: 17104
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)