Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3m09
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical ... 77 1e-14
AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical ... 77 2e-14
Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 30 2.1
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical... 28 6.3
AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical... 28 6.3
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 8.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 8.4
>AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical
protein K02D7.5 protein.
Length = 299
Score = 77.0 bits (181), Expect = 1e-14
Identities = 49/175 (28%), Positives = 82/175 (46%)
Frame = +2
Query: 227 ILQPYKEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY 406
+L+ +++ A TI F G IC I +QG+ I +PFL GV+ L+YG
Sbjct: 1 MLEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGL 60
Query: 407 ILRDDTMIQVNMFGLALNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKL 586
+ D MI VN+ G+A Y + + Y+ K Q+ L + ++ + + P L
Sbjct: 61 LKMDYVMIIVNVVGVACMAFYCVFFLIYSLPKKTFTCQLILVTSTIGGMVLWIALK-PNL 119
Query: 587 VETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYG 751
G I F +PL GL +++N+ +P P+ ++ +V+ W LYG
Sbjct: 120 --DYLGVICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYG 172
>AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical
protein Y39A1A.8 protein.
Length = 225
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Frame = +2
Query: 275 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 454
T+ G IC I +GS+ G PFL + L +QYG + DD + N G
Sbjct: 21 TVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLLKDDDVITYCNGIGCF 80
Query: 455 LNIVYVLIYFNYTQQKVKVWAQIGLA-GAVSAALIGYAQTEDPKLVETRF-GTIITAFMF 628
L Y++ ++ T+ + + I + G + + A + + L +T + G
Sbjct: 81 LQACYLMYFYYMTRNRRFLNKVISIELGIIGIVVYWVAHSTNSHLTKTTYVGNYCIFLNI 140
Query: 629 YLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIIL 760
+A+PLF + ++++NKS+E +P P+ ++ VV W+ YG I+
Sbjct: 141 CSVAAPLFDIGKVVRNKSSESLPLPLCVACFVVCLQWMFYGYIV 184
>Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical
protein C06G8.1 protein.
Length = 355
Score = 74.9 bits (176), Expect = 6e-14
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +2
Query: 248 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 427
++ +A F T+G F G IC I+K+ T+ I PFL GVV + YG++ D T+
Sbjct: 14 LLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGTV 73
Query: 428 IQVNMFGLALNIVYVLIYFNYTQQKVKVWAQI-GLAGAVSAALIGYAQTEDPKLVETRFG 604
V + L Y + Y+ T++K+ + ++ G+ G + +L+ K+ G
Sbjct: 74 KWVTGCQVILYTTYTIFYWCMTKKKLYISLKVLGVIG-ICTSLVLAVHFFGMKIFHP-LG 131
Query: 605 TIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
+ A+PL G++ +I+ +T +P P+ ++ +V+ W LYG++
Sbjct: 132 IVCLTLNIADFAAPLGGIRVVIRRWATSTLPLPLCIANFLVSTEWFLYGLL 182
>AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical
protein C54F6.4 protein.
Length = 233
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/153 (24%), Positives = 76/153 (49%)
Frame = +2
Query: 305 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIYF 484
IC IY+QG I PFL G ++ L+YG++ D +I +N G+ + + + +
Sbjct: 17 ICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAGIPIAVFNAMFFL 76
Query: 485 NYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKE 664
+++ K Q+ + + ++ +P + F I+ + + SPL GL+
Sbjct: 77 YFSKPKKYYMTQLSIVTIIILTMLMLIHF-NPNVQFLGFVCIVLNLITF--GSPLAGLRV 133
Query: 665 IIQNKSTEGMPFPIILSGTVVTFMWLLYGIILR 763
+++++ +PF + L +V +W LYGI+++
Sbjct: 134 VLRDREVITLPFVLCLVQLIVQCLWNLYGILIQ 166
>AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical
protein K11D12.5 protein.
Length = 224
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/161 (22%), Positives = 69/161 (42%)
Frame = +2
Query: 275 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 454
+IG F F+ D +K+G+ G + F+ +++ L++GY+ D T I +N L
Sbjct: 14 SIGFTFLPMFMVLDWHKRGTADGFSSVNFVLPMLVQSFWLRHGYMTNDQTNIIINSINLV 73
Query: 455 LNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYL 634
YV + Y ++ + QI A Y T D + G++ +
Sbjct: 74 FFAFYVSAFAYYQPKRKYLIGQIVAAALAVKVAFAYVDTHDSASINDAMGSMAAGAQIFS 133
Query: 635 IASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
+ ++ +K I +TE +P + + WLL+GI+
Sbjct: 134 LVGGIYEIKRAISMGTTEYIPAGFQFAIFTLILQWLLFGIL 174
>Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical
protein R10D12.9 protein.
Length = 221
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/174 (18%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +2
Query: 239 YKEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIG-IMPFLGGVVMTILNLQYGYILR 415
+ EI F +I +F ++ D K+G++ G ++ + G++ + L++G++
Sbjct: 2 FLEIFRVWIGFFSISFIFLPIYLVLDWKKRGTSDGFSAVVLIIPGIIQSFW-LRHGWMTN 60
Query: 416 DDTMIQVNMFGLALNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVET 595
+ T I +N L Y+ Y Y + + Q+ A + Y + D + +
Sbjct: 61 EWTHIIINTVNLTALSFYISAYAYYQSNRKNLIGQLISAVIIVKCAFFYVDSHDAEHTNS 120
Query: 596 RFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGII 757
GT+ + ++ ++ ++ +TE +P + + + + WLL+GI+
Sbjct: 121 AMGTVAAGAQILGLGGRVYEMRRAVKLGTTEYIPAFMQFAVSALMAQWLLFGIV 174
>Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical
protein K06A4.4 protein.
Length = 239
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 353 MPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVL-IYFNYTQQKVKVWAQIGL 529
+P++ V+ + L L+Y LRD +I + + +++ + +V+ + F T+++ + G+
Sbjct: 60 IPYICAVIGSALWLRYSIFLRDTKLILLQTYAVSMQLFFVIALIFYRTKRRKLIRLMTGI 119
Query: 530 AGAVSAAL--IGYAQTEDPK 583
A A+S IG ED K
Sbjct: 120 AAALSLLFLYIGNMNDEDGK 139
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 533 GAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEG-MPFPII 709
G VSA+ + T + LV + F T LI SP+ + + ++ +S++ P P I
Sbjct: 6 GTVSASRLFAMYTSN--LVWSLFLTSTALHAVALITSPVQAVHKWVRRQSSDSDTPIPYI 63
Query: 710 LSGTVVTFMWLLYGIILR 763
+ + + +WL Y I LR
Sbjct: 64 CA-VIGSALWLRYSIFLR 80
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 412 P*RHHDSSQHVRSGLKYRLR---ADILQLHPAEGQGLGSDRSG 531
P H S+ HVRSG++ + R A +L L P G G+G+ G
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGPG 354
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 412 P*RHHDSSQHVRSGLKYRLR---ADILQLHPAEGQGLGSDRSG 531
P H S+ HVRSG++ + R A +L L P G G+G+ G
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGPG 354
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -3
Query: 330 PCLYMSQHMKLPENICPMVTKAAIEPTI--SLYG*RISAKASILEDLCFIYWCLKLHSLR 157
PC++ Q L EN+CP A P + ++Y +I A S C+ L
Sbjct: 1016 PCVFQFQEYCLGENLCPFPNPVAACPALDSTIYTYKIEASPSFHVFQIIDVECVNSAMLM 1075
Query: 156 LGR 148
+GR
Sbjct: 1076 IGR 1078
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 551 LIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEI 667
L+ + +DPKLVE +IIT F + + +F KE+
Sbjct: 208 LLWLNKQKDPKLVENFINSIITCSKFTIFLTSIFEKKEL 246
>AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical
protein Y47G6A.7b protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 332 STRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIY 481
+T GI + F G+V + L +I+ DT+ ++N+ GL L + +L++
Sbjct: 327 NTSGITLNIF--GIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
>AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical
protein Y47G6A.7a protein.
Length = 410
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 332 STRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIY 481
+T GI + F G+V + L +I+ DT+ ++N+ GL L + +L++
Sbjct: 327 NTSGITLNIF--GIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 383 ILNLQYGYILRDDTMIQVNMFGLALNIVYVLI 478
+++L+ G ILR++ V FG L++V VLI
Sbjct: 19 VIDLKAGAILRENARKSVLFFGCPLSVVLVLI 50
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 303 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 425
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 303 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 425
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 303 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 425
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 303 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 425
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,841,933
Number of Sequences: 27780
Number of extensions: 357957
Number of successful extensions: 936
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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