Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3l22
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p pro...   132   6e-31
AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-P...   132   6e-31

>BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p
           protein.
          Length = 243

 Score =  132 bits (318), Expect = 6e-31
 Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
 Frame = +3

Query: 126 EEEIIRKLSTYIQKISNDAILNRNKFVVGLSGGSVVKYLCEGLPQVETDWSKWTLAFCDE 305
           EE++++ L   +Q+ S +A+   +KF VGLSGGS+V+ L + L       +KW   FCDE
Sbjct: 16  EEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSCNLKTAKWVFFFCDE 75

Query: 306 RVVPEDSSDSTFGIYKKDLIPKTE-LKESQFITIKQGATAQETAKDYIEKLRKVXXXXXX 482
           R V  D SDST+G Y+ + + +   ++ESQF+           A DY  K++        
Sbjct: 76  RYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVKS----QVD 131

Query: 483 XXXXXXXXMGPDGHTCSLFPGH-KLLEETEDKVAAITDSPKPPPERITLTLSSYKWSKET 659
                   MGPDGHTCSLFP     L+ET+  V  I +SPKPPPERIT TL     ++  
Sbjct: 132 RFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNV 191

Query: 660 VFLL 671
            F++
Sbjct: 192 AFVV 195


>AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-PA
           protein.
          Length = 243

 Score =  132 bits (318), Expect = 6e-31
 Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
 Frame = +3

Query: 126 EEEIIRKLSTYIQKISNDAILNRNKFVVGLSGGSVVKYLCEGLPQVETDWSKWTLAFCDE 305
           EE++++ L   +Q+ S +A+   +KF VGLSGGS+V+ L + L       +KW   FCDE
Sbjct: 16  EEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSCNLKTAKWVFFFCDE 75

Query: 306 RVVPEDSSDSTFGIYKKDLIPKTE-LKESQFITIKQGATAQETAKDYIEKLRKVXXXXXX 482
           R V  D SDST+G Y+ + + +   ++ESQF+           A DY  K++        
Sbjct: 76  RYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVKS----QVD 131

Query: 483 XXXXXXXXMGPDGHTCSLFPGH-KLLEETEDKVAAITDSPKPPPERITLTLSSYKWSKET 659
                   MGPDGHTCSLFP     L+ET+  V  I +SPKPPPERIT TL     ++  
Sbjct: 132 RFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNV 191

Query: 660 VFLL 671
            F++
Sbjct: 192 AFVV 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,847,874
Number of Sequences: 53049
Number of extensions: 505202
Number of successful extensions: 1762
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)