Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3l19
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical ... 29 2.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.4
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 5.8
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 28 5.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 5.8
AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical... 28 7.7
>Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical
protein F15D3.6 protein.
Length = 209
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 4 YIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEW 183
++ VDE + YTP D +KT+LKQ+ +VT+ + Y E + S NA KGRQ +EW
Sbjct: 101 FLRVDEKLTYTPAHEDPNKTILKQDVIVTITLPAFADYCEKTFLSIYSQNANKGRQGVEW 160
Query: 184 VIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSA 297
VI E + +++ E+ + +S ++S+
Sbjct: 161 VIDHLKKEYEAISTKVSSEVHEMSEKVLRSFGTTSSSS 198
>AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical
protein Y39C12A.1 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 190 GKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLT 363
G E E ++ KS EL +TKKS+ S D + ++ S L+++E ++
Sbjct: 212 GSSTRESSEKTTATLKSIKELNQETKKSVMTALESLGSGQDKVRAQLISILNNVETIS 269
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 136 NKISLNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSAR 300
+++ + G + +E V+ K+ + + L ++ K+T E L++ +S D I
Sbjct: 3184 DELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVA 3243
Query: 301 RSMDDISSKAKSTLDDIEK 357
+ + D +KAK L +EK
Sbjct: 3244 KDIKDSKTKAKELLQALEK 3262
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 136 NKISLNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSAR 300
+++ + G + +E V+ K+ + + L ++ K+T E L++ +S D I
Sbjct: 5041 DELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVA 5100
Query: 301 RSMDDISSKAKSTLDDIEK 357
+ + D +KAK L +EK
Sbjct: 5101 KDIKDSKTKAKELLQALEK 5119
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 136 NKISLNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSAR 300
+++ + G + +E V+ K+ + + L ++ K+T E L++ +S D I
Sbjct: 5944 DELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVA 6003
Query: 301 RSMDDISSKAKSTLDDIEK 357
+ + D +KAK L +EK
Sbjct: 6004 KDIKDSKTKAKELLQALEK 6022
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 136 NKISLNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSAR 300
+++ + G + +E V+ K+ + + L ++ K+T E L++ +S D I
Sbjct: 6847 DELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVA 6906
Query: 301 RSMDDISSKAKSTLDDIEK 357
+ + D +KAK L +EK
Sbjct: 6907 KDIKDSKTKAKELLQALEK 6925
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 136 NKISLNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSAR 300
+++ + G + +E V+ K+ + + L ++ K+T E L++ +S D I
Sbjct: 7750 DELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVA 7809
Query: 301 RSMDDISSKAKSTLDDIEK 357
+ + D +KAK L +EK
Sbjct: 7810 KDIKDSKTKAKELLQALEK 7828
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +1
Query: 157 GKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDIS 321
G + +E V+ K+ + + L ++ K+T E L++ +S D I + + D
Sbjct: 4094 GNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSK 4153
Query: 322 SKAKSTLDDIEK 357
+KAK L +EK
Sbjct: 4154 TKAKELLQALEK 4165
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 251 YYHKQRSQLMTSQHQQEDQ 307
YYH Q+ QL HQQ+ Q
Sbjct: 177 YYHNQQKQLQQQHHQQQQQ 195
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 226 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 357
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 226 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 357
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 235 KSTDELLSQTKKSIDDITTSARRSMDDISSK 327
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 226 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 357
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 226 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 357
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 28.3 bits (60), Expect = 5.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 114 LHGRPFNQQNFSKCWQRKASYRMGY 188
++G+PF+ + F +CW + Y Y
Sbjct: 465 INGKPFDIEEFGRCWTHQTGYPTVY 489
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 193 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKA 369
K E+KE+ K DE+ SQ+K + I SA S+DD + LD +++ KA
Sbjct: 303 KNSRELKEINDLIKKIKDEVESQSKGAAGAI-DSAEVSLDDTINSIVHFLDKLQQEVKA 360
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 371 LALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNF 192
+ +V ++ ++V+ L++I+SID LAD+V ++ +S + E A L+ +F
Sbjct: 92 IGIVTYNRDATVVADLNKITSIDQLADIVFGALHKASSIADSYLHAGLEAADDLLQRQSF 151
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 235 KSTDELLSQTKKSIDDITTSARRSMDDISSK 327
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical
protein Y53F4B.20 protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = -2
Query: 524 CYYIYCY*INHVNDE*TRTQMNMAGH*CSPFSIYVLQ-RHAYYSSFQLLWLALALVN--F 354
C+ + + H+ E T T +N++ H + F + Q +H +++ Q+L L + +
Sbjct: 236 CFLLLPHEYTHI--ESTYTGVNISVH-YNRFRVQKEQTKHLLHTATQVLALLKDIFSSLI 292
Query: 353 SISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQA 228
+ + ++E+SS +V+S + FF D + V + A
Sbjct: 293 PVPKIDIITMNEVSSTACFGSIVVSEVQFFSADYANQVKMLA 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,886,050
Number of Sequences: 27780
Number of extensions: 319962
Number of successful extensions: 955
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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