Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3l09
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 137 6e-33
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.6
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 5.6
AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical ... 28 5.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 5.6
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 27 9.8
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 137 bits (332), Expect = 6e-33
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 2/200 (1%)
Frame = +3
Query: 105 STVKMMQHQYWXXXXXXXXXXXXXEDECIVSSDAELDAKLELFRSISDSCLQLQRVLDQY 284
STV MQ YW EDE + +SD ELD L L+RS+ + QL +D Y
Sbjct: 26 STVNTMQRHYWTARQFIRTKLGKKEDEHLEASDNELDTCLNLYRSVHGTSFQLLNNVDNY 85
Query: 285 QERICILAQEENALGKFLRDSGK--NADASGKHMISAGKAISYCGQQRLSIRSPLLRLYH 458
+ +N LGK+L++ GK +A G+ +I+ G+++ + + + R + Y+
Sbjct: 86 ANFLLDETLVQNVLGKYLKEKGKIDKTEAVGRILIAVGRSLLFSSHRLNAARIGVSTFYN 145
Query: 459 EVETFRGRAVSDMRATVSAMEKARLEYRAALSWMKSTSAQLDPDTGRGLDNFRKAQRQVR 638
++ F RA+ D T+ A++ R EYR +L WMK TS +LDP+ ++ FR+AQ V+
Sbjct: 146 KLSVFVERAIGDCSQTIEAVQMCRTEYRGSLLWMKKTSEELDPEVDGSMEKFREAQTTVK 205
Query: 639 ESKKIFDKLTLDVLQKIDLL 698
+K+ D+L D LQK+DLL
Sbjct: 206 SNKERLDRLKTDTLQKVDLL 225
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 35.9 bits (79), Expect = 0.028
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 1/167 (0%)
Frame = +3
Query: 201 DAELDAKLELFRSISDSCLQLQRVLDQYQERICILAQEENALGKFLRDSGKNADASGKHM 380
D E +A+ E+ + I + + + +A+ E L + +
Sbjct: 93 DPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQC 152
Query: 381 ISAGKAISYCGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEYRAALSWM 560
+ + G+Q S+ + L +ET + ++D T+ E AR+EY
Sbjct: 153 TMTSETMRGVGEQAASLDACLRYFISSMETVYNQTITDTLHTIYNTESARIEYDVD---R 209
Query: 561 KSTSAQLDPDTGRGLDNFR-KAQRQVRESKKIFDKLTLDVLQKIDLL 698
SA +P G+ N A + E K ++KL D K+ LL
Sbjct: 210 NDISAATNPPQGQLTKNLPVGATEKCEEKKAKYEKLKNDAKIKMRLL 256
>Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical
protein F54C8.7a protein.
Length = 288
Score = 35.9 bits (79), Expect = 0.028
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 1/167 (0%)
Frame = +3
Query: 201 DAELDAKLELFRSISDSCLQLQRVLDQYQERICILAQEENALGKFLRDSGKNADASGKHM 380
D E +A+ E+ + I + + + +A+ E L + +
Sbjct: 74 DPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQC 133
Query: 381 ISAGKAISYCGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEYRAALSWM 560
+ + G+Q S+ + L +ET + ++D T+ E AR+EY
Sbjct: 134 TMTSETMRGVGEQAASLDACLRYFISSMETVYNQTITDTLHTIYNTESARIEYDVD---R 190
Query: 561 KSTSAQLDPDTGRGLDNFR-KAQRQVRESKKIFDKLTLDVLQKIDLL 698
SA +P G+ N A + E K ++KL D K+ LL
Sbjct: 191 NDISAATNPPQGQLTKNLPVGATEKCEEKKAKYEKLKNDAKIKMRLL 237
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.6
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +3
Query: 237 SISDSCLQLQRVLDQY---QERICILAQEENALGKFLRDSGKNADASGKHMISAGKAISY 407
S+ D+ QLQ+VLDQY Q ++ L+ E L ++ + + + A IS
Sbjct: 584 SLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRIS- 642
Query: 408 CGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEYRAALSWMKSTSAQL-- 581
+SI + L + +++ET A +D+ + A AL+ QL
Sbjct: 643 ---DLISINNNLTSIKNKLETELSTAQADLDEVTKELHAADERANRALADAARAVEQLHE 699
Query: 582 DPDTGRGLDNFRKA-QRQVRE 641
+ + +D RK+ + QV++
Sbjct: 700 EQEHSMKIDALRKSLEEQVKQ 720
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.6
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +3
Query: 237 SISDSCLQLQRVLDQY---QERICILAQEENALGKFLRDSGKNADASGKHMISAGKAISY 407
S+ D+ QLQ+VLDQY Q ++ L+ E L ++ + + + A IS
Sbjct: 584 SLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRIS- 642
Query: 408 CGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEYRAALSWMKSTSAQL-- 581
+SI + L + +++ET A +D+ + A AL+ QL
Sbjct: 643 ---DLISINNNLTSIKNKLETELSTAQADLDEVTKELHAADERANRALADAARAVEQLHE 699
Query: 582 DPDTGRGLDNFRKA-QRQVRE 641
+ + +D RK+ + QV++
Sbjct: 700 EQEHSMKIDALRKSLEEQVKQ 720
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin protein.
Length = 882
Score = 28.3 bits (60), Expect = 5.6
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +3
Query: 237 SISDSCLQLQRVLDQY---QERICILAQEENALGKFLRDSGKNADASGKHMISAGKAISY 407
S+ D+ QLQ+VLDQY Q ++ L+ E L ++ + + + A IS
Sbjct: 600 SLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRIS- 658
Query: 408 CGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEYRAALSWMKSTSAQL-- 581
+SI + L + +++ET A +D+ + A AL+ QL
Sbjct: 659 ---DLISINNNLTSIKNKLETELSTAQADLDEVTKELHAADERANRALADAARAVEQLHE 715
Query: 582 DPDTGRGLDNFRKA-QRQVRE 641
+ + +D RK+ + QV++
Sbjct: 716 EQEHSMKIDALRKSLEEQVKQ 736
>AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical
protein C17H12.4 protein.
Length = 592
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 372 KHMISAGKAISYCGQQRLSIRSPLLRLYHE 461
K M+ K I+ Q++SIR P++R Y E
Sbjct: 505 KDMVEYDKHITELKNQKISIRKPVVRFYEE 534
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 408 CGQQRLSIRSPLLRLYHEVETFRGRAVSDMRATVSAMEKARLEY 539
CG I +PL+ + E+ G +S+ R + +EK EY
Sbjct: 773 CGAGCRDIATPLIEISKEIFEKAGTCISEQRVLCNRLEKNTCEY 816
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 585 GLAEHL-SISSNSMLHDTLISPSPWQTQ*LAYHSQLDLEMFPLH 457
G+AE L ++ +N + D L+ P P Y QLD F H
Sbjct: 103 GIAEQLHAVRANKLSTDALLVPLPLYILPYHYDLQLDFSQFDTH 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,788,911
Number of Sequences: 27780
Number of extensions: 257410
Number of successful extensions: 699
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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