Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3k21
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    31   0.62 
U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical p...    29   4.4  
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U23177-7|AAM22053.1|  867|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical ...    28   5.8  

>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
 Frame = +1

Query: 286 DKGKATIDFTANVTL--KAHYVMDGQVLILPIRG--NGP----AKIKITNLRIVVTYDFT 441
           DK  A  +FT  +T+   + Y  +GQ +ILPI    + P    A   + +  +++   F 
Sbjct: 225 DKLPAATNFTGTITMIGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFM 284

Query: 442 TVAGHWVLTGYKD 480
           T  G +  TG+ D
Sbjct: 285 TALGFFGYTGFGD 297


>U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical
           protein B0495.2 protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/62 (20%), Positives = 29/62 (46%)
 Frame = +3

Query: 492 GPSSVQVQQPLRGKQGASSNNRKIHQSKLGDYNARNSTTGAQPDHKQLRGESKTTFRSSS 671
           GP + Q  +  +G+Q  S  ++K+H+ +   ++ ++ T G + +       S+       
Sbjct: 106 GPDARQKDRDFKGRQERSGRDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSERDSEKHK 165

Query: 672 RH 677
           RH
Sbjct: 166 RH 167


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 211 LKITFTDTVVTGLRGSKINSYKINLDKGKATIDFT 315
           LK + ++T+V  +  SK  S K+ +D+G+  I+FT
Sbjct: 566 LKYSISNTLVKKIEASKNWSLKVKIDEGQVQINFT 600


>Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical
           protein C47E12.4d protein.
          Length = 292

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +1

Query: 502 QFKFNNLFGGNKELAQTTEKFTNQNWEIIMQEIAPPALNQIISSCVEKVKQLFGAVPATE 681
           +F FN  F  N+E A+     TN+ W+ +++E A P+LN  +S   E V Q      AT 
Sbjct: 211 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKE-ANPSLN-TVSRVPEAVHQGTDEAAATA 267

Query: 682 L 684
           +
Sbjct: 268 I 268


>Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical
           protein C47E12.4c protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +1

Query: 502 QFKFNNLFGGNKELAQTTEKFTNQNWEIIMQEIAPPALNQIISSCVEKVKQLFGAVPATE 681
           +F FN  F  N+E A+     TN+ W+ +++E A P+LN  +S   E V Q      AT 
Sbjct: 325 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKE-ANPSLN-TVSRVPEAVHQGTDEAAATA 381

Query: 682 L 684
           +
Sbjct: 382 I 382


>Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical
           protein C47E12.4b protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +1

Query: 502 QFKFNNLFGGNKELAQTTEKFTNQNWEIIMQEIAPPALNQIISSCVEKVKQLFGAVPATE 681
           +F FN  F  N+E A+     TN+ W+ +++E A P+LN  +S   E V Q      AT 
Sbjct: 326 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKE-ANPSLN-TVSRVPEAVHQGTDEAAATA 382

Query: 682 L 684
           +
Sbjct: 383 I 383


>Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical
           protein C47E12.4a protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +1

Query: 502 QFKFNNLFGGNKELAQTTEKFTNQNWEIIMQEIAPPALNQIISSCVEKVKQLFGAVPATE 681
           +F FN  F  N+E A+     TN+ W+ +++E A P+LN  +S   E V Q      AT 
Sbjct: 257 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKE-ANPSLN-TVSRVPEAVHQGTDEAAATA 313

Query: 682 L 684
           +
Sbjct: 314 I 314


>U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical
           protein F42A10.7 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 666 CSEKLFYFLHATAYDLVERRWCYFLHYNLPILI 568
           CS     FL+AT YD   +++ Y +H + PI++
Sbjct: 44  CSSGPVQFLNATPYDSTGKQYEYPIHLSQPIVV 76


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
           protein C01F1.3a protein.
          Length = 631

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 382 NGPAKIKITNLRIVVTYDFTTVAGHWVLTGYKDHYKMDRAQFKFNNLFGGNKELAQTTEK 561
           N   K++ + L     Y  T +AG   +  Y+  Y +     + NN++G N+   +   +
Sbjct: 144 NEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVTARMNNIYGPNQWDVKVVPR 203

Query: 562 F 564
           F
Sbjct: 204 F 204


>U23177-7|AAM22053.1|  867|Caenorhabditis elegans Hypothetical
           protein C56G2.1a protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 519 PLRGKQGASSNNRKIHQSKLGDYNARNSTTGAQPDHKQLRGESKTTFRSSSR 674
           PLR  Q   + NR   + K G  N R+     Q  H+Q + E +   +   R
Sbjct: 388 PLRHLQQQHNKNRSSQKRKGGRVNGRDGVHQPQQQHQQQKKEEQGQIKKGQR 439


>AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical
           protein H28G03.4 protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 330 QGDIGREVYRCFAFI*IYFVTINFRSPQAGDHGVCKRDLQRR 205
           + D   E YRC   I   F   N R  +   HGV  R++ RR
Sbjct: 52  ENDFKNEKYRCAEIIGNLFARANLRFFRWLSHGVSARNISRR 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,312,089
Number of Sequences: 27780
Number of extensions: 332173
Number of successful extensions: 1003
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)