BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3k19
(469 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83411-1|AAB58911.1| 641|Homo sapiens carboxypeptidase Z precur... 32 0.86
BC080539-1|AAH80539.1| 652|Homo sapiens carboxypeptidase Z prot... 32 0.86
AK056317-1|BAB71147.1| 364|Homo sapiens protein ( Homo sapiens ... 32 0.86
>U83411-1|AAB58911.1| 641|Homo sapiens carboxypeptidase Z precursor
protein.
Length = 641
Score = 32.3 bits (70), Expect = 0.86
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 318 LRSGGITVITKRCQGGWVLHPSRPKHEGAHQL 223
LR G V+ RC+GGWV P R EG ++
Sbjct: 86 LRLLGCAVLAPRCEGGWVRRPCRHICEGLREV 117
>BC080539-1|AAH80539.1| 652|Homo sapiens carboxypeptidase Z
protein.
Length = 652
Score = 32.3 bits (70), Expect = 0.86
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 318 LRSGGITVITKRCQGGWVLHPSRPKHEGAHQL 223
LR G V+ RC+GGWV P R EG ++
Sbjct: 97 LRLLGCAVLAPRCEGGWVRRPCRHICEGLREV 128
>AK056317-1|BAB71147.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ31755 fis, clone NT2RI2007498, highly similar to
Homo sapiens carboxypeptidase Z precursor, mRNA. ).
Length = 364
Score = 32.3 bits (70), Expect = 0.86
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 318 LRSGGITVITKRCQGGWVLHPSRPKHEGAHQL 223
LR G V+ RC+GGWV P R EG ++
Sbjct: 97 LRLLGCAVLAPRCEGGWVRRPCRHICEGLREV 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,091,544
Number of Sequences: 237096
Number of extensions: 986475
Number of successful extensions: 1783
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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