Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3k16
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 38 0.009
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 36 0.034
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 35 0.060
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 34 0.14
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 34 0.14
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 33 0.18
04_04_0593 - 26480036-26481438,26481915-26482083 31 0.74
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 31 0.98
11_06_0262 + 21771577-21772059,21772167-21773252 31 1.3
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 31 1.3
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 31 1.3
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 29 3.0
10_01_0061 + 815761-816117,817298-818002 29 3.0
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 29 3.9
05_03_0570 - 15587147-15587209,15588249-15588446 29 5.2
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 28 6.9
01_06_1703 + 39301075-39301829,39302735-39303560 28 6.9
11_04_0376 - 16965504-16966101,16966212-16966416,16967175-169681... 28 9.1
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 28 9.1
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 28 9.1
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +3
Query: 555 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGW 734
L YL + QG W+VS + + LADKFGR T +L AIP +G
Sbjct: 76 LEYLAKDLGISENAVLQG-WVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA 134
Query: 735 IL 740
L
Sbjct: 135 FL 136
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 621 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILGY 746
S++ + + + + S LAD GRKTT+ L AI I+GW Y
Sbjct: 1032 SVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTIY 1073
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 35.1 bits (77), Expect = 0.060
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +3
Query: 537 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 716
G+ SPT ++ S + T + S S+ + + + I S +A+ GRK +L++ AI
Sbjct: 81 GFSSPTQ---DAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAI 137
Query: 717 PFIIGWI 737
P IIGW+
Sbjct: 138 PNIIGWL 144
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 615 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 740
+VSI I+ + + S+ L D FG K TL + +IP I+G +L
Sbjct: 146 VVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGALL 187
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 654 IPSAYLADKFGRKTTLLLGAIPFIIGWI 737
I S +A+ GRK +L++ AIP IIGW+
Sbjct: 117 IASGQMAEYIGRKGSLMIAAIPNIIGWL 144
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 654 IPSAYLADKFGRKTTLLLGAIPFIIGWI 737
I S +A+ GRK +L++ A+P IIGW+
Sbjct: 118 IASGQMAEYIGRKGSLIIAAVPNIIGWL 145
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 537 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 716
G S ++Y++ + + T +Q +V + + S L + +D GRK T+ LGAI
Sbjct: 59 GVMSGAIIYIQKD---LHITEFQEEILVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAI 115
Query: 717 PFIIG 731
F G
Sbjct: 116 VFQAG 120
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 621 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILG 743
S + L + + I ++ ++ FGRK TL + A+ ++IG ILG
Sbjct: 88 SSLFLSAMVAGIFASPMSRAFGRKWTLFVAAVAYLIGAILG 128
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 624 IMILCSALTPIPSAYLADKFGRKTTLLLGAIPFII 728
I+++ S+ + + S +L D+FGR+ LL G ++
Sbjct: 339 ILVVVSSASTLASMFLVDRFGRRALLLAGGAQMLV 373
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 546 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 725
S LLY+ + S+ + IVS+ + + + + D++GR+T++L+ F
Sbjct: 48 SGALLYIRDDFPSVDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILVADALFF 107
Query: 726 IG 731
G
Sbjct: 108 AG 109
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 546 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 725
S LLY+ + +++ + IVS+ + + + ++ DKFGRK ++L+ F+
Sbjct: 48 SGALLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFL 107
Query: 726 IGWIL 740
G ++
Sbjct: 108 AGALI 112
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 534 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLLLG 710
YG + YL S A Q VSI I TP+ A+LAD + GR T+++
Sbjct: 43 YGVSKNLVTYLTSVLHESNVNAAQS---VSIWIGSCFFTPLIGAFLADTYWGRYWTVVMS 99
Query: 711 AIPFIIGWIL 740
+ I+G I+
Sbjct: 100 ILVIILGMIV 109
>10_01_0061 + 815761-816117,817298-818002
Length = 353
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +3
Query: 645 LTPIPSAYLADKF-GRKTTLLL 707
LTP+ A++AD F GR+TT+LL
Sbjct: 91 LTPLVGAFIADSFLGRRTTILL 112
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 618 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWIL 740
VSI I S TP+ A+LAD + GR T ++ IIG ++
Sbjct: 89 VSIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLI 130
>05_03_0570 - 15587147-15587209,15588249-15588446
Length = 86
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 534 YGWPSPTLLYLESE--ESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLL 704
YG + ++YL +E E ++ + +W S+ +TPI AY+AD F GR T
Sbjct: 4 YGVAANLVVYLTTELREETVSSVRNVNNWTGSVW-----MTPIAGAYIADAFLGRFWTFT 58
Query: 705 LGAIPFI 725
+ ++ ++
Sbjct: 59 VSSLIYL 65
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 537 GWPSPTL----LYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLL 704
GW + T+ LY++ E + +G + +I + +T A +AD FGR+ L+
Sbjct: 19 GWDNATIAGAVLYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGA-VADSFGRRPMLI 77
Query: 705 LGAIPFIIGWIL 740
A+ + + ++
Sbjct: 78 ASAVLYFVSGLV 89
>01_06_1703 + 39301075-39301829,39302735-39303560
Length = 526
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 642 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGW 734
++TP+ +AYLAD F GR T+LL ++G+
Sbjct: 47 SITPLVAAYLADAFLGRYWTILLFMAISVLGY 78
>11_04_0376 -
16965504-16966101,16966212-16966416,16967175-16968197,
16968241-16968892,16969025-16969387,16970095-16970451
Length = 1065
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 242 EVYKRNVITDEASFWKVYVLLACWFMMREERAQCRGIATVTSEQLNDVLVVCRTKGSGER 63
++Y N ++ + S W ++ A A IA + SE+ + +V +T GS R
Sbjct: 299 QMYNMNCLSPDES-WSLFKQTAFTEQENISPANLVEIARMVSEKCKGLPLVIKTVGSILR 357
Query: 62 FE*NEL 45
FE NE+
Sbjct: 358 FETNEI 363
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 633 LCSALTPIPSAYLADKFGRKTTLLLGAIPFII 728
LC+ I + + D+FGR+ L+G I I+
Sbjct: 335 LCATFANIMAMIVVDRFGRRKLFLVGGIQMIL 366
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 621 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 740
S + L + + + ++ + K GRK T+L G F+IG +L
Sbjct: 86 SSLYLAALIASLFASVITRKLGRKMTMLGGGFIFLIGAVL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,336,637
Number of Sequences: 37544
Number of extensions: 291440
Number of successful extensions: 713
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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