Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3j18
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118476-1|AAM49845.1|  324|Drosophila melanogaster GM16085p pro...   138   9e-33
AE014296-830|AAF47886.2|  324|Drosophila melanogaster CG15014-PA...   138   9e-33
AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p pro...    29   8.4  
AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p pro...    29   8.4  
AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-P...    29   8.4  
AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-P...    29   8.4  

>AY118476-1|AAM49845.1|  324|Drosophila melanogaster GM16085p
           protein.
          Length = 324

 Score =  138 bits (333), Expect = 9e-33
 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
 Frame = +2

Query: 197 LEPGFKGFFCTCNFREKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVPXXXXXXXXXXX 376
           L+PG +GFF TCN  EK CV+E YNLLN YA  LY     E  P    P           
Sbjct: 31  LQPGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGED 90

Query: 377 XXXXXXX--IGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTA 550
                      D    E  + K     S R  RFQ V+T  +NC+F++T L  P  L   
Sbjct: 91  DPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH 150

Query: 551 IIKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPTSFSVV 715
           II D+  T    +R V+RL+PI + C+AN+PDI+ +AG+LFDK+FLKEPTS+ ++
Sbjct: 151 IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPTSYGII 205


>AE014296-830|AAF47886.2|  324|Drosophila melanogaster CG15014-PA
           protein.
          Length = 324

 Score =  138 bits (333), Expect = 9e-33
 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
 Frame = +2

Query: 197 LEPGFKGFFCTCNFREKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVPXXXXXXXXXXX 376
           L+PG +GFF TCN  EK CV+E YNLLN YA  LY     E  P    P           
Sbjct: 31  LQPGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGED 90

Query: 377 XXXXXXX--IGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTA 550
                      D    E  + K     S R  RFQ V+T  +NC+F++T L  P  L   
Sbjct: 91  DPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH 150

Query: 551 IIKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPTSFSVV 715
           II D+  T    +R V+RL+PI + C+AN+PDI+ +AG+LFDK+FLKEPTS+ ++
Sbjct: 151 IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPTSYGII 205


>AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p
           protein.
          Length = 1211

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 416 REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 589
           R  D + K  Q+  + K   V++   SN I +  T LP P  + TAI+K D      +  
Sbjct: 753 RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 812

Query: 590 RHVMRLLP 613
             ++ +LP
Sbjct: 813 DKLLNMLP 820


>AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p protein.
          Length = 1294

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 416  REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 589
            R  D + K  Q+  + K   V++   SN I +  T LP P  + TAI+K D      +  
Sbjct: 935  RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994

Query: 590  RHVMRLLP 613
              ++ +LP
Sbjct: 995  DKLLNMLP 1002


>AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-PB,
            isoform B protein.
          Length = 1294

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 416  REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 589
            R  D + K  Q+  + K   V++   SN I +  T LP P  + TAI+K D      +  
Sbjct: 935  RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994

Query: 590  RHVMRLLP 613
              ++ +LP
Sbjct: 995  DKLLNMLP 1002


>AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-PA,
            isoform A protein.
          Length = 1393

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 416  REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 589
            R  D + K  Q+  + K   V++   SN I +  T LP P  + TAI+K D      +  
Sbjct: 935  RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994

Query: 590  RHVMRLLP 613
              ++ +LP
Sbjct: 995  DKLLNMLP 1002


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,847,462
Number of Sequences: 53049
Number of extensions: 512339
Number of successful extensions: 1099
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)