Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3j16
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029137-1|ABJ17070.1|  215|Drosophila melanogaster RE05423p pro...   291   7e-79
AY051484-1|AAK92908.1|  215|Drosophila melanogaster GH14384p pro...   291   7e-79
AF218125-1|AAF23180.1|  215|Drosophila melanogaster Kisir protein.    291   7e-79
AE014134-1032|AAN10575.1|  215|Drosophila melanogaster CG9131-PB...   291   7e-79
AE014134-1031|AAF52330.1|  215|Drosophila melanogaster CG9131-PA...   291   7e-79
AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA ...    74   2e-13
BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p pro...    72   6e-13
AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p pro...    72   6e-13
AY061527-1|AAL29075.1|  246|Drosophila melanogaster LD48010p pro...    31   1.0  
AE014297-943|AAF54381.1|  246|Drosophila melanogaster CG9362-PA ...    31   1.0  

>BT029137-1|ABJ17070.1|  215|Drosophila melanogaster RE05423p
           protein.
          Length = 215

 Score =  291 bits (713), Expect = 7e-79
 Identities = 130/173 (75%), Positives = 147/173 (84%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           LLKQEA VTV GVPLS YMEDLLT+ IS NAGKGRQ +EWVIG  +TE+K +A
Sbjct: 121 LLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIA 173


>AY051484-1|AAK92908.1|  215|Drosophila melanogaster GH14384p
           protein.
          Length = 215

 Score =  291 bits (713), Expect = 7e-79
 Identities = 130/173 (75%), Positives = 147/173 (84%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           LLKQEA VTV GVPLS YMEDLLT+ IS NAGKGRQ +EWVIG  +TE+K +A
Sbjct: 121 LLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIA 173


>AF218125-1|AAF23180.1|  215|Drosophila melanogaster Kisir protein.
          Length = 215

 Score =  291 bits (713), Expect = 7e-79
 Identities = 130/173 (75%), Positives = 147/173 (84%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           LLKQEA VTV GVPLS YMEDLLT+ IS NAGKGRQ +EWVIG  +TE+K +A
Sbjct: 121 LLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIA 173


>AE014134-1032|AAN10575.1|  215|Drosophila melanogaster CG9131-PB,
           isoform B protein.
          Length = 215

 Score =  291 bits (713), Expect = 7e-79
 Identities = 130/173 (75%), Positives = 147/173 (84%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           LLKQEA VTV GVPLS YMEDLLT+ IS NAGKGRQ +EWVIG  +TE+K +A
Sbjct: 121 LLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIA 173


>AE014134-1031|AAF52330.1|  215|Drosophila melanogaster CG9131-PA,
           isoform A protein.
          Length = 215

 Score =  291 bits (713), Expect = 7e-79
 Identities = 130/173 (75%), Positives = 147/173 (84%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           LLKQEA VTV GVPLS YMEDLLT+ IS NAGKGRQ +EWVIG  +TE+K +A
Sbjct: 121 LLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIA 173


>AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA
           protein.
          Length = 236

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 43/157 (27%), Positives = 71/157 (45%)
 Frame = +2

Query: 152 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 331
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 332 ALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQE 511
                  +    E S ++P+++  T  T NL     +A+DE V Y+     S  TL  + 
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMAIDEIVVYSEQKDGS--TLAVRR 126

Query: 512 AVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVI 622
           A ++ Q    S  +      +   N  K      +V+
Sbjct: 127 AYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVL 163


>BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p
           protein.
          Length = 236

 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 43/157 (27%), Positives = 70/157 (44%)
 Frame = +2

Query: 152 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 331
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 332 ALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQE 511
                  +    E S ++P+++  T  T NL     + VDE V Y+     S  TL  + 
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYSEQKDGS--TLAVRR 126

Query: 512 AVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVI 622
           A ++ Q    S  +      +   N  K      +V+
Sbjct: 127 AYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVL 163


>AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p
           protein.
          Length = 236

 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 43/157 (27%), Positives = 70/157 (44%)
 Frame = +2

Query: 152 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 331
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 332 ALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQE 511
                  +    E S ++P+++  T  T NL     + VDE V Y+     S  TL  + 
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYSEQKDGS--TLAVRR 126

Query: 512 AVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVI 622
           A ++ Q    S  +      +   N  K      +V+
Sbjct: 127 AYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVL 163


>AY061527-1|AAL29075.1|  246|Drosophila melanogaster LD48010p
           protein.
          Length = 246

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 359 YASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYT-PHPSDSSKTLLKQEAVVTVQGV 535
           Y  E  EVNP+Q+  +LK    T C  +A+   +  T P P+   +  +K+  +  +  +
Sbjct: 75  YTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQDPVKRAKIREIVEL 134

Query: 536 PLSSYMEDLLTNKISLNAGKGRQAIEW 616
            + S ++ L    +  + GK  Q+++W
Sbjct: 135 -ICSGIQPLQNVSVLDHIGKD-QSLQW 159


>AE014297-943|AAF54381.1|  246|Drosophila melanogaster CG9362-PA
           protein.
          Length = 246

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +2

Query: 359 YASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYT-PHPSDSSKTLLKQEAVVTVQGV 535
           Y  E  EVNP+Q+  +LK    T C  +A+   +  T P P+   +  +K+  +  +  +
Sbjct: 75  YTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQDPVKRAKIREIVEL 134

Query: 536 PLSSYMEDLLTNKISLNAGKGRQAIEW 616
            + S ++ L    +  + GK  Q+++W
Sbjct: 135 -ICSGIQPLQNVSVLDHIGKD-QSLQW 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,273,915
Number of Sequences: 53049
Number of extensions: 619186
Number of successful extensions: 1265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)