Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3j16
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical pr...   157   6e-39
Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical
           protein F15D3.6 protein.
          Length = 209

 Score =  157 bits (381), Expect = 6e-39
 Identities = 71/173 (41%), Positives = 108/173 (62%)
 Frame = +2

Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
           M+IW+SEH F+H WETVAQAA+RKYPNP+N ++ G DVV++ +  G + T R++ S +  
Sbjct: 1   MRIWSSEHIFDHEWETVAQAAFRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSI 60

Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
           P WA  L G +   Y+ E + ++P +++ +L T NL    ++ VDE + YTP   D +KT
Sbjct: 61  PSWATKLTGFSGTQYSHEYTVIDPTRKEFSLTTRNLNGSSFLRVDEKLTYTPAHEDPNKT 120

Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELA 655
           +LKQ+ +VT+     + Y E    +  S NA KGRQ +EWVI     E + ++
Sbjct: 121 ILKQDVIVTITLPAFADYCEKTFLSIYSQNANKGRQGVEWVIDHLKKEYEAIS 173


>Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical
           protein B0334.4 protein.
          Length = 210

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
 Frame = +2

Query: 137 MKIWTSEHT-FNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWF 313
           MK+W S +T F + ++ VA A W +YPN     +I  DV+ER++ D  + T +L+  +  
Sbjct: 1   MKLWDSPNTSFPYSFDEVASAFWDRYPNSHAKHIISEDVLERQITDNTIVTKKLIVKQGS 60

Query: 314 -----FPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRY 466
                 PRW   +    ++    E S  + + +++   T N++      + E   Y
Sbjct: 61  SILKRVPRWISRMT-DIQVVPVIEESVYDKVSKKLVTYTRNVSHISLFQLHERCIY 115


>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
           protein F45G2.2a protein.
          Length = 1235

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 341 GTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVR 463
           GT K    +E+ E+NP + + T   +NLTF +  +V   +R
Sbjct: 66  GTPKKLTRAEVQEINPAKFEKTEDMSNLTFLNEASVLHNLR 106


>Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical
           protein R03G8.4 protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 547 LHGRPFNQQNFSKCWQRKASYRMGY 621
           ++G+PF+ + F +CW  +  Y   Y
Sbjct: 465 INGKPFDIEEFGRCWTHQTGYPTVY 489


>AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical
           protein Y39E4B.2 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 208 FSPCCLSNCFPWMVECVF*CP 146
           F+ C L +C P+M ECV  CP
Sbjct: 63  FNECLLVHCLPYMEECV--CP 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,367,578
Number of Sequences: 27780
Number of extensions: 332357
Number of successful extensions: 817
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)