Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3j08
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 72 1e-13
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 65 1e-11
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 52 1e-07
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 46 7e-06
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 45 1e-05
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 45 1e-05
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 45 1e-05
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 44 2e-05
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 44 2e-05
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 44 3e-05
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 38 0.001
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 38 0.002
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 33 0.041
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 31 0.13
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 31 0.17
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.29
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 29 0.67
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.1
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 27 2.7
SPAC56F8.05c |mug64||conserved fungal protein|Schizosaccharomyce... 27 3.6
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 6.3
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.3
SPCC4B3.09c |||mitochondrial ribosomal protein subunit L12|Schiz... 26 6.3
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 25 8.3
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 71.7 bits (168), Expect = 1e-13
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Frame = +2
Query: 194 GYKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSA 373
G++++ I+S T L ++ + AG LAD FGRK + II+ I+ +TA
Sbjct: 121 GHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHL 180
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGALASYSLGWVCS 553
+++ R + G G +++ +Y+ E+ + R +I L + G + +Y +
Sbjct: 181 WHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFE 240
Query: 554 Y-ETVCYFCITLSVI---YIIFMFALVKESPVFLVGKGREKEALHCLA 685
+ + + L+++ + +F+ + ESP LV K R +EA + LA
Sbjct: 241 HVHNGWRWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLA 288
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/118 (28%), Positives = 60/118 (50%)
Frame = +2
Query: 185 SPLGYKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTA 364
S LG+ +S + LI+S T + +I +G LAD GRK++ + I + +++ +
Sbjct: 111 SDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAAS 170
Query: 365 KSASQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGALASYSL 538
++ + +++ R I G G ++V MYI EL R +I + G L +YSL
Sbjct: 171 RNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAYSL 228
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 51.6 bits (118), Expect = 1e-07
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVA--CGFIILSSWILVLTAKS 370
Y +S GL++ + + + + +AD FG K++S+ C I+ + V S
Sbjct: 55 YSLSSARQGLLTGMVNVGSLFGCIISSPIADRFG-KRLSIIGFCAVYIIGIIVQVTAVPS 113
Query: 371 ASQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITF-LFSIGAL---ASYSL 538
QI++A++ G+ G ++ Y E S R TV++T+ LF G + A ++
Sbjct: 114 WVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIR--GTVVVTYQLFVTGGIFIAACINM 171
Query: 539 GWVCSYETVCY-FCITLSVIY-IIFMFAL--VKESPVFLVGKGREKEALHCLA 685
G ++T + I +++++ II M + + ESP +L+ G+++EA+ L+
Sbjct: 172 GTHKLHKTAQWRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLS 224
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 45.6 bits (103), Expect = 7e-06
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTA-KSA 373
Y S GLI+ + M + + L D G++ + + L IL +TA S
Sbjct: 51 YSYSSARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPSW 110
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSI-GAL---ASYSLG 541
QI++A++ GLA G ++ + E+ + R T ++ T+ ++ G + A ++G
Sbjct: 111 VQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGT--IVTTYQLAVTGGIFIAACINMG 168
Query: 542 WVCSYETVCY-FCITLSVIYIIFMF---ALVKESPVFLVGKGREKEAL 673
++T + + +++++ I MF + + ESP +L+ G+++EAL
Sbjct: 169 THKLHKTAQWRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKDEEAL 216
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 44.8 bits (101), Expect = 1e-05
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = +2
Query: 200 KISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQ 379
++S + SCT P+ G D++GRKK +A + L T++S Q
Sbjct: 125 QVSWTATAYMISCTAFQPLF-----GKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQ 179
Query: 380 ILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGALASYSLG--WVCS 553
++ AR I G+ G V + + ++ R T II F+IG+ +G +
Sbjct: 180 LVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGYFADQ 239
Query: 554 YETVCYFCITLSVIYIIFM 610
Y F I + +I I F+
Sbjct: 240 YTWRIGFLIQVPLIAIAFL 258
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 44.8 bits (101), Expect = 1e-05
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 9/173 (5%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRK-KISVACGFIILSSWILVLTAKSA 373
Y S GLI+ + + + +AD G++ I V ++ I V T S
Sbjct: 19 YSYSSSRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSW 78
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGAL--ASYSLGW- 544
QIL+A++ GL+ G ++ Y E+ R ++G A ++G
Sbjct: 79 VQILVAKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFITLGIFIAACINMGTH 138
Query: 545 VCSYETVCYFCITLSVIYIIFMFALV-----KESPVFLVGKGREKEALHCLAF 688
S+ T + I++ + + + LV ESP +L+ G++ EAL + +
Sbjct: 139 KYSHGTTAQWRISIGINLLWGIITLVGIIFLPESPRYLIAIGKDDEALKIMCY 191
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 44.8 bits (101), Expect = 1e-05
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 9/183 (4%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTA-KSA 373
Y S GL+ + + + L D FG++K + + ++ I+ LT S
Sbjct: 51 YSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPSW 110
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGAL--ASYSLG-- 541
Q+++A++ GL G ++ Y E R ++G A ++G
Sbjct: 111 VQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGIFIAACINMGTH 170
Query: 542 -WVCSYETVCYFCITLSVIYIIFMF---ALVKESPVFLVGKGREKEALHCLAFYRGASVV 709
+ E I +++++ I MF + ESP +L KGR +E + L R A +
Sbjct: 171 KYTTHPEAQWRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEECMKILT--RNAGLP 228
Query: 710 TEH 718
+H
Sbjct: 229 ADH 231
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 44.4 bits (100), Expect = 2e-05
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRK-KISVACGFIILSSWILVLTAKSA 373
Y S L++ + M + + G+K I+ G I+ +LV S
Sbjct: 51 YSYSAWRQALLTGTVNAGCLFGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTAVPSW 110
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGAL--ASYSLGWV 547
QI++ +L GL G ++ Y E+ R + G L A ++G
Sbjct: 111 VQIMVGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQTCGTLIAACINMGTH 170
Query: 548 CSYETVCY-FCITLSVIYIIFMFA---LVKESPVFLVGKGREKEALHCL 682
+T + +++++ IF+ + ESP +L+ KGR++EAL +
Sbjct: 171 KLRKTASWRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIM 219
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 44.0 bits (99), Expect = 2e-05
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRK-KISVACGFIILSSWILVLTAKSA 373
Y S L++ + M + + G+K I G I++ +LV S
Sbjct: 51 YSYSAWRQALLTGTINAGCLFGAMLSSPFTERIGKKYSICFFSGVYIIAELLLVTAVPSW 110
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITF-LFSIGA--------LA 526
Q+L+ +++ G+ G ++ Y E+ R V+ T+ +FS GA +
Sbjct: 111 IQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGA--VVATYQIFSTGAALVAACINMG 168
Query: 527 SYSLGWVCSYETVCYFCITLSVIYIIFMFALVKESPVFLVGKGREKEALHCL 682
++ L S+ T + ++ ++ + L ESP +L+ KGR++EAL +
Sbjct: 169 THKLRKTASWRTSFGINMLWGILLMVGVLFL-PESPRYLIYKGRDEEALRIM 219
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 43.6 bits (98), Expect = 3e-05
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Frame = +2
Query: 197 YKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTA-KSA 373
Y S GLI+ + + L D G++ + + L IL +TA S
Sbjct: 51 YSYSSARQGLITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSW 110
Query: 374 SQILIARLICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSI-GAL---ASYSLG 541
QI++A++ GL+ G ++ + E+ R T ++ T+ ++ G + A ++G
Sbjct: 111 VQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGT--IVTTYQLAVTGGIFIAACINMG 168
Query: 542 WVCSYETVCY-FCITLSVIYIIFMF---ALVKESPVFLVGKGREKEALHCLA 685
++T + + +++++ I F + + ESP +L+ GR++EAL +A
Sbjct: 169 THKLHKTAQWRVSMGINLLWGIITFIGISFLPESPRYLISVGRDEEALQIMA 220
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = +2
Query: 281 LADVFGRKKISVACGFIILSSWILVLTAKSASQILIARLICGLAFGCNIIVVIMYIGELC 460
+ ++FGR++ + FI I V TAK ++I R CG I V ++
Sbjct: 133 MCELFGRRRPMIIAVFIFCIFHIAVATAKDIQTVMICRFFCGFFGSSPITTVAGSFSDMF 192
Query: 461 QTSTRATATVIITFLFSIGALASYSLG 541
TR + + + G L S +G
Sbjct: 193 SARTRGLVIAVYSAIIFNGPLMSPIVG 219
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 37.5 bits (83), Expect = 0.002
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Frame = +2
Query: 263 TMFAGTLADVFGRKKI-SVACGFIILSS-WILV--LTAKSASQILIARLICGLAFGCNII 430
T + GT+ D++GR+ + + F++L W+L K +L A + GL + +
Sbjct: 204 TAYYGTMGDIYGRRLVLFITVSFLLLGDLWLLYQSYAPKHPYFVLFAAALKGLGGYISTV 263
Query: 431 VVIM--YIGELCQTSTRATATVIITFLFSIGALASYSL-GWVCSYET----VCYFCITLS 589
V ++ + +T RA + + +G SL G++ Y V Y T
Sbjct: 264 VASQNSFVADCSKTEFRAWYLGLNFAAYHLGTALGPSLSGFIVQYTPHMYYVFYITSTFW 323
Query: 590 VIYIIFMFALVKES 631
+IY+++++ ++ ES
Sbjct: 324 IIYLLYVWLILPES 337
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 33.1 bits (72), Expect = 0.041
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Frame = +2
Query: 215 EAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQILIAR 394
E LI S +L I M + L++VFGR+ + I + + A++ +Q+ I R
Sbjct: 83 EKALILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQMYIFR 142
Query: 395 LICGLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIG-ALASYSLGWVCSYETVCY 571
+ G + + I +L R A +++ +G + G++ Y T +
Sbjct: 143 FLAGFGSATPMGLGSGTISDLFTPDERGKAVAVMSLAPLLGPTIGPVVSGFIAEYTTYKW 202
Query: 572 FCITLSVIYIIFMFAL 619
+ I+ F+FAL
Sbjct: 203 I-FWSTTIFSGFIFAL 217
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 31.5 bits (68), Expect = 0.13
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = +2
Query: 224 LISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQILIARLIC 403
L+ S ++ M G ++D+FGRK + V + + I A + + I I
Sbjct: 129 LVQSLFIVGNAFGPMLLGPMSDIFGRKWVYVGSLILYIIFQIPQALAYNLPMMAINSAIA 188
Query: 404 GLAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGALASYSLG 541
G AFG + + + +C T T I+ LF GA A S+G
Sbjct: 189 G-AFGSSALANV--ASSMCDIFTPETVGFGIS-LFVWGANAGASIG 230
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 31.1 bits (67), Expect = 0.17
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 200 KISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQ 379
K+ A L S ++ I + L+++ GR+ + + I + I A + +
Sbjct: 133 KVGPEVANLSCSLMVVGFGIGPLVISPLSEMIGRRIVYLVTLMIYIVLQIPCALAPNIAC 192
Query: 380 ILIARLICGLAFGCNIIVVI-MYIGELCQTSTRATATVIITFLFSIGALASYSLG 541
+LI R CG FGC + + I ++ +T R A I F F+ G A +LG
Sbjct: 193 LLIVRFFCG-CFGCTPLTLAGGVISDVWETRERGLA---IAF-FAAGPYAGPTLG 242
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 30.3 bits (65), Expect = 0.29
Identities = 21/112 (18%), Positives = 48/112 (42%)
Frame = +2
Query: 227 ISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQILIARLICG 406
I + L+ + F G +++V GRK + + L + A++ +++ R + G
Sbjct: 130 IGTAYSLAETSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQG 189
Query: 407 LAFGCNIIVVIMYIGELCQTSTRATATVIITFLFSIGALASYSLGWVCSYET 562
+ G + +V + I ++ TR T + + + ++ +G S T
Sbjct: 190 IGGGGIMSLVTIVIADITPLQTRPYYTGCMGVTWGVASVMGPLIGGAISQNT 241
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 29.1 bits (62), Expect = 0.67
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Frame = +2
Query: 227 ISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVLTAKSASQILIARLICG 406
I + L+ + F G +++V GRK + + L + A++ +++ R + G
Sbjct: 130 IGTAYTLAQTSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQG 189
Query: 407 LAFGCNIIVVIMYIGELCQTSTRA--TATVIITF-LFSI-GALASYSLGWVCSYETVCYF 574
+ G +V + I ++ TR T + +T+ L S+ G L ++ S+ + +
Sbjct: 190 IGGGGITSLVTIVIADITPLQTRPYYTGCMGVTWGLASVMGPLIGGAISQKASWRWIFFI 249
Query: 575 CIT---LSVIYIIFMFALVKESPV 637
+ LS+ +IF LV + V
Sbjct: 250 NLPTGGLSLALLIFFLNLVPKPTV 273
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 351 SIQDERMMKPHATEIFFLPNTSASVPANMVTIIGLSMVQELMRPASLSDIL 199
S+Q E ++ P +E+ +T S P N + + L+ P +SD L
Sbjct: 214 SVQSELLVDPSFSELSAYSHTHHSYPPNEHDVNAVQKALSLLPPPEVSDFL 264
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 267 MVTIIGLSMVQEL--MRPASLSDILYPKGERSLWSAGMAYDGQTKVKAAW 124
M+T+ + +Q L M SL I+Y G +WS G+ G + W
Sbjct: 205 MITLFQFAQIQALYSMMATSLPAIIYSWGRNFMWSMGIIRIGFMQDVFTW 254
>SPAC56F8.05c |mug64||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 262 HYHRTQHGARADETGLSLRYLVPQRRAVTLERGYGI*WP 146
HY RT+ G+R +E L Y+ +++ +L+ Y + P
Sbjct: 37 HYLRTKIGSRVEELSLPEDYVELEQQVDSLKEAYNLVLP 75
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 25.8 bits (54), Expect = 6.3
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 179 DRSPLGYKISEREAGLISSCTMLSPMIVTMFAGTLADVFGRKKISVACGFIILSSWILVL 358
D +P + E A +S+ + + A +AD F + ++ C +I IL+L
Sbjct: 116 DATPGALNLGESGADGLSNFFTFWCYVTPVGAALIADQFLGRYNTIVCSAVIYFIGILIL 175
Query: 359 TAKSASQILIARLICGLAFGCNIIVV 436
T + ++ A G F ++I++
Sbjct: 176 TCTAIPSVIDAGKSMG-GFVVSLIII 200
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 471 VEVWHSSPMYMMTTMM-LQPNASPQISRAMRIWL 373
+EVW Y ++ LQP++ PQ+S + WL
Sbjct: 323 IEVWTPPNDYTYALVVDLQPDSPPQLSSNLITWL 356
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 328 EATRH*NLLSSEYIGERSGEHGHYHRTQHGARADETGLSLRY 203
+A RH SS +SGEH H+H H A + T SL +
Sbjct: 1288 KAERHETSTSSRK-SSKSGEHHHHHNEGH-ADSSSTRTSLAH 1327
>SPCC4B3.09c |||mitochondrial ribosomal protein subunit
L12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 206
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 314 LKSSFFRIHRRAFRRTWSLSSDSAWCKS 231
LK S FRI R R +LSS W +S
Sbjct: 30 LKYSMFRIASRQTRNLRALSSSKNWARS 57
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 300 LPNTSASVP-ANMVTIIGLSMVQELMRPASLSDILYPKG 187
LP S+S+P + VTI S+V+ + SL D+L KG
Sbjct: 173 LPPPSSSIPRSKAVTIEDPSIVRTNIYDPSLDDVLKGKG 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,014,854
Number of Sequences: 5004
Number of extensions: 62387
Number of successful extensions: 231
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -