Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3i12
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein. 195 1e-49
BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified ... 195 1e-49
BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified ... 195 1e-49
BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein. 195 1e-49
BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein. 195 1e-49
AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein. 195 1e-49
AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein. 195 1e-49
BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 192 1e-48
BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 192 1e-48
AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein. 191 2e-48
BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 56 1e-07
AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 56 1e-07
AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens ... 56 1e-07
BC017914-1|AAH17914.1| 247|Homo sapiens nipsnap homolog 3B (C. ... 54 6e-07
BC005202-1|AAH05202.1| 247|Homo sapiens nipsnap homolog 3B (C. ... 54 6e-07
AL359846-8|CAH73582.1| 247|Homo sapiens nipsnap homolog 3B (C. ... 54 6e-07
AF287262-2|AAK43527.1| 247|Homo sapiens SNAP protein protein. 54 6e-07
AK002137-1|BAA92101.1| 247|Homo sapiens protein ( Homo sapiens ... 51 4e-06
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein. 32 2.6
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min... 32 2.6
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein. 32 2.6
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit... 32 2.6
AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein. 32 2.6
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 3.5
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 3.5
>CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein.
Length = 285
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 25 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 83
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 84 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 142
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 143 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 202
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 203 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 239
>AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 195 bits (476), Expect = 1e-49
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Frame = +2
Query: 125 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 298
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 299 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++ Y K ++ + IH K C LVG+W G+ DQA+HL++Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 479 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWG 658
+++ + R M+ SR Q LL FSFW RS NIYE+RSY L+PGTMIEWG
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWG 203
Query: 659 NNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
N WAR + +R+ NEA G+FSQIG+LY VHH+W Y+
Sbjct: 204 NYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR 240
>BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 192 bits (468), Expect = 1e-48
Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Frame = +2
Query: 170 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 343
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 344 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
+H + + C LVG+W G+ DQA+HL+++ GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERS 156
Query: 524 KMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNE 703
+M+ SR Q LL FSFW + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ E
Sbjct: 157 QMLLSRRNQLLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQE 216
Query: 704 AFAGYFSQIGRLYNVHHIWCYK 769
A G+FSQIG LY VHH+W YK
Sbjct: 217 AVGGFFSQIGELYVVHHLWAYK 238
>BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 192 bits (468), Expect = 1e-48
Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Frame = +2
Query: 170 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 343
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 344 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
+H + + C LVG+W G+ DQA+HL+++ GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERS 156
Query: 524 KMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNE 703
+M+ SR Q LL FSFW + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ E
Sbjct: 157 QMLLSRRNQLLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQE 216
Query: 704 AFAGYFSQIGRLYNVHHIWCYK 769
A G+FSQIG LY VHH+W YK
Sbjct: 217 AVGGFFSQIGELYVVHHLWAYK 238
>AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein.
Length = 284
Score = 191 bits (466), Expect = 2e-48
Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Frame = +2
Query: 170 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 343
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 344 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
+H + + C LVG+W G+ DQA+HL+++ GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERT 156
Query: 524 KMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNE 703
+M+ SR Q LL FSFW + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ E
Sbjct: 157 QMLLSRRNQLLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQE 216
Query: 704 AFAGYFSQIGRLYNVHHIWCYK 769
A G+FSQIG LY VHH+W YK
Sbjct: 217 AVGGFFSQIGELYVVHHLWAYK 238
>BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 56.4 bits (130), Expect = 1e-07
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Frame = +2
Query: 260 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFK 436
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++K
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 437 YVGGFEKIDKAKQLFKQDSSYQ---LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNI 607
Y + + K L K D +Q L+ + + + YL+ W E +
Sbjct: 90 YDNFAHRTEVRKALAK-DKEWQEQFLIPNLALIDKQESEITYLVP---WCKLEKPPKEGV 145
Query: 608 YEIRSYSLKPGTMIEWGNNWARGL-TYRRAQNEAFAGYF-SQIGRLYNVHHIW 760
YE+ ++ +KPG WG+ + R + + G F ++ G L VH +W
Sbjct: 146 YELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLW 198
Score = 43.6 bits (98), Expect = 8e-04
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S + + SR L + SF G + YE RSY LKP M E+ N+ +
Sbjct: 3 VLRSALTRALASRTLAPQMCSSF-ATGPRQYDGIFYEFRSYYLKPSKMNEFLENFEKNAH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R A +E GY+S GR+ V HIW Y
Sbjct: 62 LRTAHSE-LVGYWSVEFGGRMNTVFHIWKY 90
>AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 56.4 bits (130), Expect = 1e-07
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Frame = +2
Query: 260 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFK 436
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++K
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 437 YVGGFEKIDKAKQLFKQDSSYQ---LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNI 607
Y + + K L K D +Q L+ + + + YL+ W E +
Sbjct: 90 YDNFAHRTEVRKALAK-DKEWQEQFLIPNLALIDKQESEITYLVP---WCKLEKPPKEGV 145
Query: 608 YEIRSYSLKPGTMIEWGNNWARGL-TYRRAQNEAFAGYF-SQIGRLYNVHHIW 760
YE+ ++ +KPG WG+ + R + + G F ++ G L VH +W
Sbjct: 146 YELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLW 198
Score = 43.6 bits (98), Expect = 8e-04
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S + + SR L + SF G + YE RSY LKP M E+ N+ +
Sbjct: 3 VLRSALTRALASRTLAPQMCSSF-ATGPRQYDGIFYEFRSYYLKPSKMNEFLENFEKNAH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R A +E GY+S GR+ V HIW Y
Sbjct: 62 LRTAHSE-LVGYWSVEFGGRMNTVFHIWKY 90
>AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13953 fis, clone Y79AA1001078. ).
Length = 247
Score = 56.4 bits (130), Expect = 1e-07
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Frame = +2
Query: 260 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFK 436
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++K
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 437 YVGGFEKIDKAKQLFKQDSSYQ---LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNI 607
Y + + K L K D +Q L+ + + + YL+ W E +
Sbjct: 90 YDNFAHRTEVQKALAK-DKEWQEQFLIPNLALIDKQESEITYLVP---WCKLEKPPKEGV 145
Query: 608 YEIRSYSLKPGTMIEWGNNWARGL-TYRRAQNEAFAGYF-SQIGRLYNVHHIW 760
YE+ ++ +KPG WG+ + R + + G F ++ G L VH +W
Sbjct: 146 YELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLW 198
Score = 43.6 bits (98), Expect = 8e-04
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S + + SR L + SF G + YE RSY LKP M E+ N+ +
Sbjct: 3 VLRSALTRALASRTLAPQMCSSF-ATGPRQYDGIFYEFRSYYLKPSKMNEFLENFEKNAH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R A +E GY+S GR+ V HIW Y
Sbjct: 62 LRTAHSE-LVGYWSVEFGGRMNTVFHIWKY 90
>BC017914-1|AAH17914.1| 247|Homo sapiens nipsnap homolog 3B (C.
elegans) protein.
Length = 247
Score = 54.0 bits (124), Expect = 6e-07
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 YALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDM-DQALHLFKYV 442
Y T+ ++P +++ +++N K+++ L S+ ELVG W+V G ++ H++KY
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNIHLRTSYS-----ELVGFWSVEFGGRTNKVFHIWKYD 91
Query: 443 GGFEKIDKAKQLF--KQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI 616
+ + K L K+ ++ + + + YL+ W E +YE+
Sbjct: 92 NFAHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIP---WSKLEKPPKEGVYEL 148
Query: 617 RSYSLKPGTMIEWGNNWARGLT--YRRAQNEAFAGYFSQIGRLYNVHHIW 760
+ +KPG WG+ + R + + + ++ G L VH +W
Sbjct: 149 AVFQMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLW 198
Score = 37.9 bits (84), Expect = 0.040
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S K + SR L + SF G + YE R+Y LKP M + N + +
Sbjct: 3 VLRSGLTKALASRTLAPQVCSSF-ATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R + +E G++S GR V HIW Y
Sbjct: 62 LRTSYSE-LVGFWSVEFGGRTNKVFHIWKY 90
>BC005202-1|AAH05202.1| 247|Homo sapiens nipsnap homolog 3B (C.
elegans) protein.
Length = 247
Score = 54.0 bits (124), Expect = 6e-07
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 YALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDM-DQALHLFKYV 442
Y T+ ++P +++ +++N K+++ L S+ ELVG W+V G ++ H++KY
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNIHLRTSYS-----ELVGFWSVEFGGRTNKVFHIWKYD 91
Query: 443 GGFEKIDKAKQLF--KQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI 616
+ + K L K+ ++ + + + YL+ W E +YE+
Sbjct: 92 NFAHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIP---WSKLEKPPKEGVYEL 148
Query: 617 RSYSLKPGTMIEWGNNWARGLT--YRRAQNEAFAGYFSQIGRLYNVHHIW 760
+ +KPG WG+ + R + + + ++ G L VH +W
Sbjct: 149 AVFQMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLW 198
Score = 37.9 bits (84), Expect = 0.040
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S K + SR L + SF G + YE R+Y LKP M + N + +
Sbjct: 3 VLRSGLTKALASRTLAPQVCSSF-ATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R + +E G++S GR V HIW Y
Sbjct: 62 LRTSYSE-LVGFWSVEFGGRTNKVFHIWKY 90
>AL359846-8|CAH73582.1| 247|Homo sapiens nipsnap homolog 3B (C.
elegans) protein.
Length = 247
Score = 54.0 bits (124), Expect = 6e-07
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 YALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDM-DQALHLFKYV 442
Y T+ ++P +++ +++N K+++ L S+ ELVG W+V G ++ H++KY
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNIHLRTSYS-----ELVGFWSVEFGGRTNKVFHIWKYD 91
Query: 443 GGFEKIDKAKQLF--KQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI 616
+ + K L K+ ++ + + + YL+ W E +YE+
Sbjct: 92 NFAHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIP---WSKLEKPPKEGVYEL 148
Query: 617 RSYSLKPGTMIEWGNNWARGLT--YRRAQNEAFAGYFSQIGRLYNVHHIW 760
+ +KPG WG+ + R + + + ++ G L VH +W
Sbjct: 149 AVFQMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLW 198
Score = 37.9 bits (84), Expect = 0.040
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S K + SR L + SF G + YE R+Y LKP M + N + +
Sbjct: 3 VLRSGLTKALASRTLAPQVCSSF-ATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R + +E G++S GR V HIW Y
Sbjct: 62 LRTSYSE-LVGFWSVEFGGRTNKVFHIWKY 90
>AF287262-2|AAK43527.1| 247|Homo sapiens SNAP protein protein.
Length = 247
Score = 54.0 bits (124), Expect = 6e-07
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 YALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDM-DQALHLFKYV 442
Y T+ ++P +++ +++N K+++ L S+ ELVG W+V G ++ H++KY
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNIHLRTSYS-----ELVGFWSVEFGGRTNKVFHIWKYD 91
Query: 443 GGFEKIDKAKQLF--KQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI 616
+ + K L K+ ++ + + + YL+ W E +YE+
Sbjct: 92 NFAHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIP---WSKLEKPPKEGVYEL 148
Query: 617 RSYSLKPGTMIEWGNNWARGLT--YRRAQNEAFAGYFSQIGRLYNVHHIW 760
+ +KPG WG+ + R + + + ++ G L VH +W
Sbjct: 149 AVFQMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLW 198
Score = 37.9 bits (84), Expect = 0.040
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S K + SR L + SF G + YE R+Y LKP M + N + +
Sbjct: 3 VLRSGLTKALASRTLAPQVCSSF-ATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R + +E G++S GR V HIW Y
Sbjct: 62 LRTSYSE-LVGFWSVEFGGRTNKVFHIWKY 90
>AK002137-1|BAA92101.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ11275 fis, clone PLACE1009375. ).
Length = 247
Score = 51.2 bits (117), Expect = 4e-06
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 YALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDM-DQALHLFKYV 442
Y T+ ++P +++ +++N K+++ L S+ ELVG W+V G ++ H++KY
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNIHLRTSYS-----ELVGFWSVEFGGRTNKVFHIWKYD 91
Query: 443 GGFEKIDKAKQLF--KQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI 616
+ + K L K+ ++ + + + YL+ W E +YE+
Sbjct: 92 NFPHRAEVRKALANCKEWQEQSIIPNLARIDKQETEITYLIP---WSKLEKPPKEGVYEL 148
Query: 617 RSYSLKPGTMIEWGNNWARGLT--YRRAQNEAFAGYFSQIGRLYNVHHIW 760
+ +KPG WG+ + R + + + ++ G L VH +W
Sbjct: 149 AVFQMKPGGPGLWGDAFERAINAHVNLGYTKVVGVFHTEYGGLNRVHVLW 198
Score = 37.9 bits (84), Expect = 0.040
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 503 LLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLT 682
+L S K + SR L + SF G + YE R+Y LKP M + N + +
Sbjct: 3 VLRSGLTKALASRTLAPQVCSSF-ATGPRQYDGTFYEFRTYYLKPSNMNAFMENLKKNIH 61
Query: 683 YRRAQNEAFAGYFSQI--GRLYNVHHIWCY 766
R + +E G++S GR V HIW Y
Sbjct: 62 LRTSYSE-LVGFWSVEFGGRTNKVFHIWKY 90
>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
Length = 1165
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 353 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 637 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 693
>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 353 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
Length = 1131
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 353 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 603 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 659
>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
antigen HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 353 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein.
Length = 996
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 353 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 523
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 468 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 524
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 456 FSNP--PTYLNKCRA*SISPTDTVHDPTSSQPSSALCECI 343
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 456 FSNP--PTYLNKCRA*SISPTDTVHDPTSSQPSSALCECI 343
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,421,038
Number of Sequences: 237096
Number of extensions: 2460122
Number of successful extensions: 4469
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4443
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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