Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3i12
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061048-1|AAL28596.1|  273|Drosophila melanogaster LD01807p pro...   324   8e-89
AE014298-2327|AAN09384.1|  273|Drosophila melanogaster CG9212-PC...   324   8e-89
AE014298-2326|AAN09383.1|  273|Drosophila melanogaster CG9212-PB...   324   8e-89
AE014298-2325|AAF48562.2|  273|Drosophila melanogaster CG9212-PA...   324   8e-89
AJ249798-1|CAB56699.1|  193|Drosophila melanogaster NIPSNAP prot...   250   1e-66

>AY061048-1|AAL28596.1|  273|Drosophila melanogaster LD01807p
           protein.
          Length = 273

 Score =  324 bits (796), Expect = 8e-89
 Identities = 150/227 (66%), Positives = 169/227 (74%)
 Frame = +2

Query: 89  MNSLNKLSVYSKLVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIY 268
           M  L  L    K      R +ST+   N  + WFSKLLVR+IEPTKESHSRMLSDKE+IY
Sbjct: 1   MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIY 60

Query: 269 ALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGG 448
           ALHTHN+RPDS+ +YL NYK  V LI+  KA L CELV SWTV VGDMDQ LHL+KY GG
Sbjct: 61  ALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGG 120

Query: 449 FEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYS 628
           FEKID+AK+    D  Y  L  ER K +RSRHLQYLLAFS+WP    R+  NIYE+RSY 
Sbjct: 121 FEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYR 180

Query: 629 LKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
           L PGTMIEWGNNWAR + YR+  NEAFAG+FSQIGRLYNVHHIWCYK
Sbjct: 181 LTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQIGRLYNVHHIWCYK 227


>AE014298-2327|AAN09384.1|  273|Drosophila melanogaster CG9212-PC,
           isoform C protein.
          Length = 273

 Score =  324 bits (796), Expect = 8e-89
 Identities = 150/227 (66%), Positives = 169/227 (74%)
 Frame = +2

Query: 89  MNSLNKLSVYSKLVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIY 268
           M  L  L    K      R +ST+   N  + WFSKLLVR+IEPTKESHSRMLSDKE+IY
Sbjct: 1   MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIY 60

Query: 269 ALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGG 448
           ALHTHN+RPDS+ +YL NYK  V LI+  KA L CELV SWTV VGDMDQ LHL+KY GG
Sbjct: 61  ALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGG 120

Query: 449 FEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYS 628
           FEKID+AK+    D  Y  L  ER K +RSRHLQYLLAFS+WP    R+  NIYE+RSY 
Sbjct: 121 FEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYR 180

Query: 629 LKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
           L PGTMIEWGNNWAR + YR+  NEAFAG+FSQIGRLYNVHHIWCYK
Sbjct: 181 LTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQIGRLYNVHHIWCYK 227


>AE014298-2326|AAN09383.1|  273|Drosophila melanogaster CG9212-PB,
           isoform B protein.
          Length = 273

 Score =  324 bits (796), Expect = 8e-89
 Identities = 150/227 (66%), Positives = 169/227 (74%)
 Frame = +2

Query: 89  MNSLNKLSVYSKLVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIY 268
           M  L  L    K      R +ST+   N  + WFSKLLVR+IEPTKESHSRMLSDKE+IY
Sbjct: 1   MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIY 60

Query: 269 ALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGG 448
           ALHTHN+RPDS+ +YL NYK  V LI+  KA L CELV SWTV VGDMDQ LHL+KY GG
Sbjct: 61  ALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGG 120

Query: 449 FEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYS 628
           FEKID+AK+    D  Y  L  ER K +RSRHLQYLLAFS+WP    R+  NIYE+RSY 
Sbjct: 121 FEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYR 180

Query: 629 LKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
           L PGTMIEWGNNWAR + YR+  NEAFAG+FSQIGRLYNVHHIWCYK
Sbjct: 181 LTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQIGRLYNVHHIWCYK 227


>AE014298-2325|AAF48562.2|  273|Drosophila melanogaster CG9212-PA,
           isoform A protein.
          Length = 273

 Score =  324 bits (796), Expect = 8e-89
 Identities = 150/227 (66%), Positives = 169/227 (74%)
 Frame = +2

Query: 89  MNSLNKLSVYSKLVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIY 268
           M  L  L    K      R +ST+   N  + WFSKLLVR+IEPTKESHSRMLSDKE+IY
Sbjct: 1   MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIY 60

Query: 269 ALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGG 448
           ALHTHN+RPDS+ +YL NYK  V LI+  KA L CELV SWTV VGDMDQ LHL+KY GG
Sbjct: 61  ALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGG 120

Query: 449 FEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYS 628
           FEKID+AK+    D  Y  L  ER K +RSRHLQYLLAFS+WP    R+  NIYE+RSY 
Sbjct: 121 FEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYR 180

Query: 629 LKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIWCYK 769
           L PGTMIEWGNNWAR + YR+  NEAFAG+FSQIGRLYNVHHIWCYK
Sbjct: 181 LTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQIGRLYNVHHIWCYK 227


>AJ249798-1|CAB56699.1|  193|Drosophila melanogaster NIPSNAP protein
           protein.
          Length = 193

 Score =  250 bits (613), Expect = 1e-66
 Identities = 120/190 (63%), Positives = 136/190 (71%)
 Frame = +2

Query: 89  MNSLNKLSVYSKLVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIY 268
           M  L  L    K      R +ST+   N  + WFSKLLVR+IEPTKESHSRMLSDKE+IY
Sbjct: 1   MLKLRNLLAVGKSNNNAVRSLSTTPSRNDSESWFSKLLVRKIEPTKESHSRMLSDKEIIY 60

Query: 269 ALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGG 448
           ALHTHN+RPDS+ +YL NYK  V LI+  KA L CELV SWTV VGDMDQ LHL+KY GG
Sbjct: 61  ALHTHNVRPDSMGSYLNNYKTTVALINEKKANLSCELVASWTVQVGDMDQCLHLWKYTGG 120

Query: 449 FEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYS 628
           FEKID+AK+    D  Y  L  ER K +RSRHLQYLLAFS+WP    R+  NIYE+RSY 
Sbjct: 121 FEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGKNIYEMRSYR 180

Query: 629 LKPGTMIEWG 658
           L PGTMIEWG
Sbjct: 181 LTPGTMIEWG 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,346,266
Number of Sequences: 53049
Number of extensions: 727750
Number of successful extensions: 1643
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)