Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3i12
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 169 2e-42
L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPS... 163 1e-40
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 31 0.91
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 31 0.91
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 31 0.91
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006795-1|AAF59492.2| 435|Caenorhabditis elegans Hypothetical ... 29 4.8
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 28 6.4
AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear recep... 28 6.4
AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical... 28 6.4
AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical... 28 6.4
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 28 6.4
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 28 6.4
AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear recep... 28 6.4
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 28 6.4
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 28 6.4
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 28 6.4
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 28 8.5
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 28 8.5
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 28 8.5
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 169 bits (410), Expect = 2e-42
Identities = 79/200 (39%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Frame = +2
Query: 182 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQHVDLIH 349
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL + ++ + ++
Sbjct: 282 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKYKNEMN 341
Query: 350 SHKAELGCELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGK 526
+ ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++ K
Sbjct: 342 QKNPSI--ELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAK 399
Query: 527 MVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEA 706
+ R + +FS+W E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+
Sbjct: 400 LCGRRKNLIVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQD 459
Query: 707 FAGYFSQIGRLYNVHHIWCY 766
G+F+Q+G+LY V+HIW Y
Sbjct: 460 VGGFFAQVGQLYVVYHIWAY 479
>L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical
protein K02D10.1b protein.
Length = 289
Score = 169 bits (410), Expect = 2e-42
Identities = 79/200 (39%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Frame = +2
Query: 182 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQHVDLIH 349
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL + ++ + ++
Sbjct: 45 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKYKNEMN 104
Query: 350 SHKAELGCELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGK 526
+ ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++ K
Sbjct: 105 QKNPSI--ELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAK 162
Query: 527 MVRSRHLQYLLAFSFWPAGEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEA 706
+ R + +FS+W E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+
Sbjct: 163 LCGRRKNLIVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQD 222
Query: 707 FAGYFSQIGRLYNVHHIWCY 766
G+F+Q+G+LY V+HIW Y
Sbjct: 223 VGGFFAQVGQLYVVYHIWAY 242
>AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPSNAP
protein protein.
Length = 231
Score = 163 bits (396), Expect = 1e-40
Identities = 73/182 (40%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
Frame = +2
Query: 224 KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSV 403
K+SHS +LS+ E++Y THN RP D YL + ++ + ++ + ELVGSWT +
Sbjct: 5 KQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKYKNEMNQKNPSI--ELVGSWTCAY 62
Query: 404 G-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFWPA 580
G DQA+HL+++ G+E +D + L +DS + +++ K+ R + +FS+W
Sbjct: 63 GRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAKLCGRRKNLIVKSFSYWRE 122
Query: 581 GEVRSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQIGRLYNVHHIW 760
E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+G+LY V+HIW
Sbjct: 123 PEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQVGQLYVVYHIW 182
Query: 761 CY 766
Y
Sbjct: 183 AY 184
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 384 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 506
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2590 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2630
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 384 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 506
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 384 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 506
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 384 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 506
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 191 SKLLVRRIEPTKESHSRMLSDKEVIYALHTHN----IRPDSVDNYLKNYKQHVDLIHSHK 358
SK+ RIE K SHS E I H+ + +R D K YK+ D++HSH
Sbjct: 568 SKVEEERIEEEKISHSPPPMTFEPIRKRHSQSEISRMRRADDDLLQKLYKEVADILHSH- 626
Query: 359 AELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++G + + S + + L+ + +E+++K + +
Sbjct: 627 -DVGIAEINTLGASENSLARWQKLYSEL--YEELEKVRNM 663
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 191 SKLLVRRIEPTKESHSRMLSDKEVIYALHTHN----IRPDSVDNYLKNYKQHVDLIHSHK 358
SK+ RIE K SHS E I H+ + +R D K YK+ D++HSH
Sbjct: 568 SKVEEERIEEEKISHSPPPMTFEPIRKRHSQSEISRMRRADDDLLQKLYKEVADILHSH- 626
Query: 359 AELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQL 478
++G + + S + + L+ + +E+++K + +
Sbjct: 627 -DVGIAEINTLGASENSLARWQKLYSEL--YEELEKVRNM 663
>AC006795-1|AAF59492.2| 435|Caenorhabditis elegans Hypothetical
protein Y50D4B.7 protein.
Length = 435
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 287 IRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDK 466
+ PD DNY+K + +SHK + G L + VG++ + + V FEKIDK
Sbjct: 250 LHPDLEDNYVKFTYDIISNTYSHKRQNGSSLEPYF---VGNVKRVENRTLGVVYFEKIDK 306
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 485 QDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNN 604
+D+ QL+ RHLQY A +FWP G NN
Sbjct: 191 KDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNN 230
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 DNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGF-EKIDKAKQLF 481
D+Y + +K+ + I SH + T+ + + Q LH+F + F ++ KA L
Sbjct: 143 DSYEEYFKRRISTIVSHYCQHNANECPGVTLRMSHVSQVLHVFFFFFPFLSQVAKAFHLE 202
Query: 482 KQDSSYQLLESERGKM 529
K +L E ++
Sbjct: 203 KALKLLKLAEQRHARL 218
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 DNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGF-EKIDKAKQLF 481
D+Y + +K+ + I SH + T+ + + Q LH+F + F ++ KA L
Sbjct: 143 DSYEEYFKRRISTIVSHYCQHNANECPGVTLRMSHVSQVLHVFFFFFPFLSQVAKAFHLE 202
Query: 482 KQDSSYQLLESERGKM 529
K +L E ++
Sbjct: 203 KALKLLKLAEQRHARL 218
>AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 406
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 711 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 610
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 151 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 184
>AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical
protein Y39B6A.17b protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 711 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 610
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical
protein Y39B6A.17a protein.
Length = 509
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 711 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 610
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 DNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGF-EKIDKAKQLF 481
D+Y + +K+ + I SH + T+ + + Q LH+F + F ++ KA L
Sbjct: 143 DSYEEYFKRRISTIVSHYCQHNANECPGVTLRMSHVSQVLHVFFFFFPFLSQVAKAFHLE 202
Query: 482 KQDSSYQLLESERGKM 529
K +L E ++
Sbjct: 203 KALKLLKLAEQRHARL 218
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 DNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGF-EKIDKAKQLF 481
D+Y + +K+ + I SH + T+ + + Q LH+F + F ++ KA L
Sbjct: 143 DSYEEYFKRRISTIVSHYCQHNANECPGVTLRMSHVSQVLHVFFFFFPFLSQVAKAFHLE 202
Query: 482 KQDSSYQLLESERGKM 529
K +L E ++
Sbjct: 203 KALKLLKLAEQRHARL 218
>AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 470
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 711 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 610
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 105 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 138
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 485 QDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNN 604
+D+ QL+ RHLQY A +FWP G NN
Sbjct: 218 KDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNN 257
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 485 QDSSYQLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNN 604
+D+ QL+ RHLQY A +FWP G NN
Sbjct: 246 KDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNN 285
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 146 VISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHT 280
V+ AL+ W LL+RR+ K S R+ + + + A+H+
Sbjct: 2 VVFPIALIGVMANWTVALLIRRLPSLKNSFGRLTASQSIGDAIHS 46
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 170 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHTHNI 289
NT+ + + +E K+ H ML+DK V +H H++
Sbjct: 579 NTEGQQGNSKMKANLETIKDIHKAMLADKHVEAHIHEHDV 618
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 495 LESCLNNCLALSIFSNPPTYLNKCRA*SISPTDTVHDPTSSQPSS 361
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 495 LESCLNNCLALSIFSNPPTYLNKCRA*SISPTDTVHDPTSSQPSS 361
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,030,428
Number of Sequences: 27780
Number of extensions: 389191
Number of successful extensions: 1015
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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