Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3i12
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      25   0.78 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.2  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 39 YTELIKKTPCYHP 1
          + EL+K TPC HP
Sbjct: 57 FRELLKSTPCKHP 69


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
 Frame = +2

Query: 500 QLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI-------RSYSLKPGTMIEWG 658
           ++LES RGK   S++ +       W    + +P + Y I       +SY L   T+  W 
Sbjct: 139 RVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGL---TLPSWT 195

Query: 659 NN 664
           NN
Sbjct: 196 NN 197


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
 Frame = +2

Query: 500 QLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI-------RSYSLKPGTMIEWG 658
           ++LES RGK   S++ +       W    + +P + Y I       +SY L   T+  W 
Sbjct: 154 RVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGL---TLPSWT 210

Query: 659 NN 664
           NN
Sbjct: 211 NN 212


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
 Frame = +2

Query: 500 QLLESERGKMVRSRHLQYLLAFSFWPAGEVRSPNNIYEI-------RSYSLKPGTMIEWG 658
           ++LES RGK   S++ +       W    + +P + Y I       +SY L   T+  W 
Sbjct: 42  KVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGL---TLPSWT 98

Query: 659 NN 664
           NN
Sbjct: 99  NN 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,061
Number of Sequences: 438
Number of extensions: 4544
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)