Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3i06
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 101 5e-22
01_01_1013 - 8015552-8015613,8016898-8018035 33 0.21
04_04_1252 + 32093522-32093642,32093912-32094078,32094832-320950... 32 0.49
07_03_1661 + 28441201-28441987,28442092-28442171,28442442-284425... 31 0.85
03_05_0650 - 26423829-26424179,26424379-26424612,26424961-264252... 31 0.85
04_04_1256 + 32124826-32124946,32125388-32125554,32125731-321259... 31 1.1
04_04_1255 + 32119565-32119685,32120052-32120218,32120332-321205... 30 1.5
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 30 2.0
09_02_0123 + 4537231-4537366,4538088-4538171,4538432-4538586,453... 30 2.0
08_01_1052 + 10712380-10712545,10713229-10713386,10713495-10714199 30 2.0
07_03_1068 - 23732282-23732409,23733170-23733329,23733432-237335... 29 2.6
06_01_0272 + 2016836-2017963 29 2.6
04_04_1253 + 32097840-32097963,32098154-32098329,32098413-320986... 29 2.6
01_01_1112 + 8808544-8808695,8808818-8808961,8809302-8809380,880... 29 2.6
03_02_1003 - 13127251-13128468 29 3.4
03_02_0573 - 9571040-9571234,9571352-9571444,9571735-9571818,957... 29 3.4
02_05_1179 + 34761054-34761198,34761293-34761447,34761541-347617... 29 3.4
02_05_1161 - 34583072-34583249,34583363-34583715,34583820-345840... 29 3.4
02_01_0604 + 4497210-4497569,4497637-4497822,4498218-4498573,449... 29 3.4
01_06_1271 + 35890317-35890762,35891113-35891173,35891669-358918... 29 3.4
01_03_0042 - 11893004-11893645 29 3.4
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 29 4.5
05_04_0020 - 17199627-17199947,17200129-17200203,17200301-172003... 29 4.5
04_04_1258 + 32165918-32166041,32167218-32167384,32167569-321677... 29 4.5
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 29 4.5
03_05_1047 + 29935929-29935974,29948868-29949709,29950162-29950350 29 4.5
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 29 4.5
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 29 4.5
08_02_0816 - 21499417-21499627,21502965-21503317,21505461-215056... 28 6.0
02_05_1294 + 35525704-35525975,35527647-35527717,35527817-355280... 28 6.0
01_07_0388 + 43236629-43237612 28 6.0
01_01_0967 - 7604362-7604589,7604866-7605012,7605351-7605545 28 6.0
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938... 28 7.9
07_03_1519 + 27390204-27390590,27390591-27390809,27392516-273929... 28 7.9
01_06_1620 + 38697960-38698131,38698532-38700732 28 7.9
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 101 bits (242), Expect = 5e-22
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 15/195 (7%)
Frame = +1
Query: 139 SVIIGGGTGFIGKHLGELLSSKGYDIMNVAR--------MPASKNISWSTIEASGLPK-- 288
+V I G TGF+G+ L + L S+ + + + R PAS + E K
Sbjct: 43 TVSITGATGFVGRRLVQKLLSEDHKVCVLTRSASKATSVFPASTFPGITIAEQGDWDKCI 102
Query: 289 -DTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQD--KPKVFVLVT 459
++AVVN AG M + W+P K+ ++ SRI T + IN A +P VFV T
Sbjct: 103 QGSTAVVNLAG---MPISTRWSPEIKKEIKESRINVTSKVVNYINNASGDARPSVFVSAT 159
Query: 460 GVGAYEPSNVNKYDESSPTTGTDFFSRLVVEWE-KAAQVDPP-VRLVIIRSGAVLGRWGG 633
+G Y S ++ +DESSP+ G D+ + + EWE +A QV+ VRLV++R G VLG+ GG
Sbjct: 160 AIGFYGTSEISSFDESSPS-GNDYLAEVCREWEARACQVNQEDVRLVLLRIGVVLGKDGG 218
Query: 634 MIKNMFLPFFLGFGG 678
+ M +P F+ F G
Sbjct: 219 ALAKM-IPLFMMFAG 232
>01_01_1013 - 8015552-8015613,8016898-8018035
Length = 399
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 421 KAQDKPKVFVLVTGVGAYEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQVDPPVR 588
KA P+ V + P NV + S G + ++R V+EW+ A ++PP+R
Sbjct: 309 KATKLPREIPTVAFIHPELPGNVAYFFMRSRLFGVNLYTRKVLEWQFFAMLNPPMR 364
>04_04_1252 +
32093522-32093642,32093912-32094078,32094832-32095050,
32095143-32095302,32095696-32095825,32095998-32096151
Length = 316
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP--ASKNISWSTIEASG 279
K+ + GG+G+I L ++L KGY + R P KN + ++A G
Sbjct: 7 KTACVTGGSGYIASALIKMLLQKGYAVKTTVRNPDDMEKNSHFKELQALG 56
>07_03_1661 +
28441201-28441987,28442092-28442171,28442442-28442525,
28443181-28443255,28443704-28444015
Length = 445
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNV 225
V++ GG GF+G HL + L ++G +M V
Sbjct: 128 VVVTGGAGFVGSHLVDRLLARGDSVMVV 155
>03_05_0650 -
26423829-26424179,26424379-26424612,26424961-26425236,
26425372-26425648,26425751-26425764,26425843-26425989,
26426306-26426366,26426570-26426604,26426688-26426882,
26428230-26428439,26428865-26428940,26429519-26429799
Length = 718
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +1
Query: 214 IMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYT 393
+++V+R AS N S T+ G+PK T ++C + F FTK + + ++
Sbjct: 129 LLHVSR--ASTNPSHFTVLVRGVPKSTKESISCTVESF--FTKYHVSSYLSHQIIYKVGK 184
Query: 394 TKALATAINKAQDKPKVF 447
+ + T KA K K F
Sbjct: 185 LQKIVTGAKKAYKKFKHF 202
>04_04_1256 +
32124826-32124946,32125388-32125554,32125731-32125934,
32126063-32126222,32126379-32126592,32126707-32126854
Length = 337
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP--ASKNISWSTIEASGLPK 288
K+ + GG G+I L ++L KGY + R P KN +EA G K
Sbjct: 7 KTACVTGGNGYIASALIKMLLQKGYAVNTTVRNPDDMRKNSHLKGLEALGTLK 59
>04_04_1255 +
32119565-32119685,32120052-32120218,32120332-32120532,
32120700-32120747,32121079-32121238,32121540-32121777,
32121874-32122021
Length = 360
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP--ASKNISWSTIEASG 279
K+ + GG G+I L ++L KGY + R P +KN ++A G
Sbjct: 7 KTACVTGGNGYIASALIKMLLEKGYAVNTTVRNPDDMAKNSHLKDLQALG 56
>12_02_0067 +
13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 AKSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKDTSAVVNC 312
+K++++ GGT FIG L LL +G+ + R A + + +S V++
Sbjct: 577 SKNILVMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYAEFSSKVLHL 636
Query: 313 AG-QQFMDFTKS 345
G +Q DF K+
Sbjct: 637 KGDRQDFDFVKT 648
>09_02_0123 +
4537231-4537366,4538088-4538171,4538432-4538586,
4539115-4539294,4539814-4540169,4540797-4540953
Length = 355
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 148 IGGGTGFIGKHLGELLSSKGYDIMNVARMPASKNIS 255
+GG GFIG + + L +GY + AR P+S+ S
Sbjct: 44 VGGAGGFIGSWVVKELLLRGYAVRGTARDPSSQKNS 79
>08_01_1052 + 10712380-10712545,10713229-10713386,10713495-10714199
Length = 342
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP--ASKN 249
++V + G GFI L +LL KGY + R P A+KN
Sbjct: 22 RTVCVTGAGGFIASWLVKLLLEKGYAVRGTVRNPDDAAKN 61
>07_03_1068 -
23732282-23732409,23733170-23733329,23733432-23733543,
23733924-23734021,23734207-23734615,23734815-23734966,
23735802-23736010,23736708-23736795,23737353-23737673
Length = 558
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 463 VGAYEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQVDPPVRLVIIRSGAVLGRWGGMIK 642
VG Y ++ + + + G RL +E A++ P ++ +R V+GRW G++
Sbjct: 143 VGQYRVTDSDSLEAAMEAAGR---IRLTIE----AKLSPGPPMLNLRRHGVIGRWHGLVD 195
Query: 643 NMFLPFFLG 669
N+ FLG
Sbjct: 196 NVASGNFLG 204
>06_01_0272 + 2016836-2017963
Length = 375
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMPASKN 249
K ++ G TG G +L ELL KGY++ + R ++ N
Sbjct: 32 KVALVTGITGQDGSYLTELLLGKGYEVHGLIRRSSNFN 69
>04_04_1253 +
32097840-32097963,32098154-32098329,32098413-32098622,
32098720-32098879,32098993-32099212,32099288-32099438
Length = 346
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP 237
K+V + GG G++ L ++L KGY + R P
Sbjct: 8 KTVCVTGGNGYVASLLVKMLLEKGYAVQTSVRDP 41
>01_01_1112 +
8808544-8808695,8808818-8808961,8809302-8809380,
8809477-8809555,8810338-8810377,8810455-8810589,
8810901-8811038,8811596-8811881
Length = 350
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 157 GTGFIGKHLGELLSSKGYDIMNVARMPASK 246
GTGF+G+++ + L ++G+ + PA K
Sbjct: 34 GTGFVGRYVSQRLLAQGWRVSGTCTSPAKK 63
>03_02_1003 - 13127251-13128468
Length = 405
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 139 SVIIGGGTGFIGKHLGELLSSKGYDIMNVAR 231
+V++ G TG+IG+++ L +G+ ++ VAR
Sbjct: 74 TVLVTGATGYIGRYVVRELLRRGHPVVAVAR 104
>03_02_0573 -
9571040-9571234,9571352-9571444,9571735-9571818,
9572401-9572480,9572609-9572759,9573067-9573579
Length = 371
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNV 225
V++ GG GF+G HL + L ++G ++ V
Sbjct: 110 VVVTGGAGFVGSHLVDELLARGDSVIVV 137
>02_05_1179 +
34761054-34761198,34761293-34761447,34761541-34761723,
34761825-34762177,34762288-34762451,34762837-34762930,
34763898-34763958
Length = 384
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNVARMPA-SKNISWSTIEAS 276
V + G GFIG + + L +GY + AR PA SKN +E +
Sbjct: 17 VCVTGAGGFIGSWVVKELLIRGYHVRGTARDPADSKNAHLLELEGA 62
>02_05_1161 -
34583072-34583249,34583363-34583715,34583820-34584002,
34584096-34584250,34584346-34584493
Length = 338
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNVARMPA-SKNISWSTIEAS 276
V + G GFIG + + L +GY + AR PA SKN +E +
Sbjct: 18 VCVTGAGGFIGSWVVKELLIRGYHVRGTARDPADSKNAHLLELEGA 63
>02_01_0604 +
4497210-4497569,4497637-4497822,4498218-4498573,
4499042-4499122,4499451-4499610,4499855-4499920
Length = 402
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 127 MTAKSVIIGGGTGFIGKHLGELLSSKGYDIMNVAR 231
M A V + G GFIG + +LL ++GY + +R
Sbjct: 1 MAAAVVCVTGAGGFIGSWIVKLLLARGYAVRGTSR 35
>01_06_1271 +
35890317-35890762,35891113-35891173,35891669-35891813,
35891903-35891982,35892465-35892548,35892644-35892718,
35893150-35893242,35893315-35893503
Length = 390
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNV 225
+ V++ GG GF+G HL + L +G ++ V
Sbjct: 101 RRVVVTGGAGFVGSHLVDRLLEQGDSVIVV 130
>01_03_0042 - 11893004-11893645
Length = 213
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 133 AKSVIIGGGTGFIGKHLGELLSSKGYDIMNV 225
A V++ GG GF+G HL + L +G ++ V
Sbjct: 112 ALRVLVTGGAGFVGSHLVDRLVERGDSVIVV 142
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 368 FCLNPGVQDLVKSMNCCPAQLTTAEVSFGKPEASI--VDQDIFFEAGIRATFIISYPFDE 195
F NP + N PA +++ +S G+P + Q IFF I +T + D+
Sbjct: 542 FLANPTGESSNHGKNLAPANASSSAISSGQPSERLTYTGQSIFFGGPILSTSGRNVVIDQ 601
Query: 194 SSSPK 180
PK
Sbjct: 602 DDVPK 606
>05_04_0020 -
17199627-17199947,17200129-17200203,17200301-17200384,
17200483-17200562,17201354-17201508,17202602-17203215
Length = 442
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNV 225
V++ GG GF+G HL + L +G ++ V
Sbjct: 127 VLVTGGAGFVGSHLVDRLVERGDSVIVV 154
>04_04_1258 +
32165918-32166041,32167218-32167384,32167569-32167769,
32168472-32168631,32168729-32168942,32169160-32169307
Length = 337
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP 237
K+ + GG G+I L ++L KGY + R P
Sbjct: 7 KTACVTGGNGYIASALIKMLLQKGYAVNTTVRNP 40
>04_03_0819 + 20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNVAR 231
+++ GG+GF+G + + SKG ++++++R
Sbjct: 1013 IVVLGGSGFVGSAICKAAVSKGIEVVSLSR 1042
>03_05_1047 + 29935929-29935974,29948868-29949709,29950162-29950350
Length = 358
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 379 SRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDESSPTTGTD 528
+R+Y TKA+ DK ++FV G + +N+N YD S TD
Sbjct: 315 ARVYPTKAVG-------DKARLFVFNNGESDVKVTNLNAYDMGSAKITTD 357
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = -2
Query: 383 REFCTFCLNPGVQDLVKSMNC-------CPAQLTTAEVSFGKPEASIVDQDIFFEAGIRA 225
R F TFCL+P +Q+++ + C PA T ++ K + + + I EA +
Sbjct: 326 RSFHTFCLDPPLQEIIGTWECSWCKSNAAPAVKVTEVLTSKKIQRLVGHRRILQEADFQY 385
Query: 224 TFIISY 207
F++ +
Sbjct: 386 QFLVKW 391
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDI 216
V + GG+GFIG L LL +GY +
Sbjct: 12 VCVTGGSGFIGSWLVRLLLDRGYTV 36
>08_02_0816 -
21499417-21499627,21502965-21503317,21505461-21505649,
21505819-21505973,21506026-21506245
Length = 375
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMP 237
++V + G G+I L +LL KGY + R P
Sbjct: 26 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNP 59
>02_05_1294 +
35525704-35525975,35527647-35527717,35527817-35528004,
35528153-35528276,35528423-35528553,35529009-35529132,
35529753-35529844,35529895-35529936,35530036-35530071
Length = 359
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 127 MTAKSVIIGGGTGFIGKHLGELLSSKG 207
M K V++ GG+G++G+HL L++ G
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALAAGG 27
>01_07_0388 + 43236629-43237612
Length = 327
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
+ V++ GG GFIG + +L ++GY +
Sbjct: 5 RRVLVTGGNGFIGSWIVRILLARGYAV 31
>01_01_0967 - 7604362-7604589,7604866-7605012,7605351-7605545
Length = 189
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 127 MTAKSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMPAS 243
M + +++ GGTG +G+HL G+ + R PA+
Sbjct: 1 MASSRILVIGGTGRLGRHLVTASLDAGHPTAVLVRRPAT 39
>09_02_0435 -
9384225-9384412,9385084-9385133,9385209-9385274,
9385360-9385451,9385893-9385975,9386181-9386259,
9386888-9387115,9387196-9387297,9387719-9387854,
9387984-9388033,9389391-9389618
Length = 433
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 130 TAKSVIIGGGTGFIGKHLGELLSSKGYDIM 219
T+++V++ GG G+IG H L + G+ ++
Sbjct: 16 TSRTVLVTGGAGYIGSHTVLQLLAAGFRVV 45
>07_03_1519 +
27390204-27390590,27390591-27390809,27392516-27392962,
27393076-27393274,27393372-27393456,27393566-27393998
Length = 589
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 208 YDIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAG 318
+D +N A +P+S + S + AS LP D SA N G
Sbjct: 149 HDNVNSASLPSSASASAGALPASLLPHDNSAGRNING 185
>01_06_1620 + 38697960-38698131,38698532-38700732
Length = 790
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 319 QQFMDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVF 447
Q F DFT +W PG K + +N + K + + ++A P +F
Sbjct: 154 QSFDDFTDTWLPGNKLS-RNKKTGVIKRMISWKDRADPAPGMF 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,401,059
Number of Sequences: 37544
Number of extensions: 362140
Number of successful extensions: 969
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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