Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3i06
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000989-1|AAH00989.1| 293|Homo sapiens chromosome 14 open read... 171 2e-42
AF226050-1|AAF86950.1| 319|Homo sapiens HCDI protein. 142 1e-33
AK123513-1|BAC85634.1| 198|Homo sapiens protein ( Homo sapiens ... 73 9e-13
AF054839-1|AAC69715.1| 222|Homo sapiens tetraspan TM4SF protein. 32 2.2
U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein. 31 2.8
BC032000-1|AAH32000.1| 412|Homo sapiens zinc finger, DHHC-type ... 31 2.8
BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate decarbo... 31 2.8
BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroi... 31 2.8
BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroi... 31 2.8
AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein. 31 2.8
AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid dec... 31 2.8
AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK023215-1|BAB14468.1| 412|Homo sapiens protein ( Homo sapiens ... 31 2.8
>BC000989-1|AAH00989.1| 293|Homo sapiens chromosome 14 open reading
frame 124 protein.
Length = 293
Score = 171 bits (416), Expect = 2e-42
Identities = 86/180 (47%), Positives = 116/180 (64%), Gaps = 1/180 (0%)
Frame = +1
Query: 142 VIIGGGTGFIGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQ 321
V++GGGTGFIG L +LL+++G+++ V+R P I+W + ASGLP A VN AG+
Sbjct: 3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPS-CDAAVNLAGE 61
Query: 322 QFMDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYD 501
++ + W F++ V SR+ TT+ LA AI KA PK +VLVTGV Y+PS +YD
Sbjct: 62 NILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYD 121
Query: 502 ESSPTTGTDFFSRLVVEWEKAAQV-DPPVRLVIIRSGAVLGRWGGMIKNMFLPFFLGFGG 678
E SP DFFS LV +WE AA++ R V++RSG VLGR GG + +M LPF LG GG
Sbjct: 122 EDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGG 181
>AF226050-1|AAF86950.1| 319|Homo sapiens HCDI protein.
Length = 319
Score = 142 bits (343), Expect = 1e-33
Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +1
Query: 208 YDIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRI 387
+++ V+R P I+W + ASGLP A VN AG+ ++ + W F++ V SR+
Sbjct: 51 HEVTLVSRKPGPGRITWDELAASGLPS-CDAAVNLAGENILNPLRRWNETFQKEVLGSRL 109
Query: 388 YTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDESSPTTGTDFFSRLVVEWEKAA 567
TT+ LA AI KA PK +VLVTGV Y+PS +YDE SP DFFS LV +WE AA
Sbjct: 110 ETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA 169
Query: 568 QV-DPPVRLVIIRSGAVLGRWGGMIKNMFLPFFLGFGG 678
++ R V++RSG VLGR GG + +M LPF LG GG
Sbjct: 170 RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGG 207
>AK123513-1|BAC85634.1| 198|Homo sapiens protein ( Homo sapiens
cDNA FLJ41519 fis, clone BRTHA2012392, highly similar
to Homo sapiens HCDI (HCDI) mRNA. ).
Length = 198
Score = 72.9 bits (171), Expect = 9e-13
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 472 YEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQV-DPPVRLVIIRSGAVLGRWGGMIKNM 648
Y+PS +YDE SP DFFS LV +WE AA++ R V++RSG VLGR GG + +M
Sbjct: 17 YQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHM 76
Query: 649 FLPFFLGFG 675
LPF LG G
Sbjct: 77 LLPFRLGLG 85
>AF054839-1|AAC69715.1| 222|Homo sapiens tetraspan TM4SF protein.
Length = 222
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 180 FRRTAFIKRI*YNERS-SYASLEKYILVNNRGLRLTKRYFGCCQLCW 317
FR IK + ++S Y + Y+LV L + +FGCC CW
Sbjct: 36 FRFGGAIKELSSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGPCW 82
>U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein.
Length = 373
Score = 31.5 bits (68), Expect = 2.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 133 AKSVIIGGGTGFIGKHLGELLSSKGYDI 216
AK + GG+GF+G+H+ E L ++GY +
Sbjct: 37 AKRCTVIGGSGFLGQHMVEQLLARGYAV 64
>BC032000-1|AAH32000.1| 412|Homo sapiens zinc finger, DHHC-type
containing 11 protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 525 CPSCRTALIIFIYI*RFICTNSCN*YKYFWFILSFVYSGSQGFSCVDT*ILYILFE 358
C SC + F + ++I N+C + +WF S V S + G C+ +LY+L +
Sbjct: 141 CISCNKCVSGFDHHCKWI--NNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQ 194
>BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate
decarboxylase 1 protein.
Length = 420
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
K ++I GG GF+G HL + L G+++
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEV 115
>BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 31.5 bits (68), Expect = 2.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 133 AKSVIIGGGTGFIGKHLGELLSSKGYDI 216
AK + GG+GF+G+H+ E L ++GY +
Sbjct: 37 AKRCTVIGGSGFLGQHMVEQLLARGYAV 64
>BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 31.5 bits (68), Expect = 2.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 133 AKSVIIGGGTGFIGKHLGELLSSKGYDI 216
AK + GG+GF+G+H+ E L ++GY +
Sbjct: 37 AKRCTVIGGSGFLGQHMVEQLLARGYAV 64
>AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein.
Length = 420
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
K ++I GG GF+G HL + L G+++
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEV 115
>AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid
decarboxylase protein.
Length = 420
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
K ++I GG GF+G HL + L G+++
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEV 115
>AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ90689 fis, clone PLACE1006219, weakly similar to
PUTATIVE UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2). ).
Length = 425
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
K ++I GG GF+G HL + L G+++
Sbjct: 94 KRILITGGAGFVGSHLTDKLMMDGHEV 120
>AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ90639 fis, clone PLACE1003845, highly similar to
UDP-glucuronate decarboxylase 1. ).
Length = 420
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 136 KSVIIGGGTGFIGKHLGELLSSKGYDI 216
K ++I GG GF+G HL + L G+++
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEV 115
>AK023215-1|BAB14468.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ13153 fis, clone NT2RP3003409, weakly similar to
Human DHHC-domain-containing cysteine-rich protein mRNA.
).
Length = 412
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 525 CPSCRTALIIFIYI*RFICTNSCN*YKYFWFILSFVYSGSQGFSCVDT*ILYILFE 358
C SC + F + ++I N+C + +WF S V S + G C+ +LY+L +
Sbjct: 141 CISCNKCVSGFDHHCKWI--NNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQ 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,186,176
Number of Sequences: 237096
Number of extensions: 2141148
Number of successful extensions: 8180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8175
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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