Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3i05
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 50 2e-06
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 46 3e-05
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 44 2e-04
Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical pr... 40 0.001
U23177-3|AAA64333.2| 316|Caenorhabditis elegans Lethal protein ... 40 0.001
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 40 0.001
Z77652-8|CAB01114.1| 314|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical p... 40 0.003
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 39 0.003
AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily a... 36 0.031
Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical pr... 33 0.16
U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical pr... 32 0.50
AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical ... 32 0.50
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 31 0.88
Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 30 2.0
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 30 2.0
U80439-3|AAB37640.1| 323|Caenorhabditis elegans Dehydrogenases,... 29 2.7
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 28 6.2
U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,... 28 8.2
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 49.6 bits (113), Expect = 2e-06
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Frame = +3
Query: 300 KEGAKHIAALDVDSVNGKILEDELNDNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYID 479
K GA+ + A D+DS N L + + + CDV++ D +K
Sbjct: 29 KHGARVVVA-DLDSGNAAATAKALPASQSHSS---FACDVSNADSVKGLSEHVKSLGTPS 84
Query: 480 VVVNCAGIMNDRPNVYLKE------IAVNVTALITSSFKAYNLMRKDHGGKGGTIINISS 641
++VNCAGI D + +K+ I VN+T + S +A+ D+ +IIN+SS
Sbjct: 85 ILVNCAGITKDSTLLKMKQEQWDSVIKVNLTGVFHVS-QAFVKASVDNNNHPLSIINVSS 143
Query: 642 IVGLFQASLLPVYAATKSAVLQFSTCLGME 731
IVG YAATK+ V+ F+ E
Sbjct: 144 IVGKMGNFGQTNYAATKAGVIGFTKSAAKE 173
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +3
Query: 435 ETVYDNVIKEHKYIDVVVNCAGIMNDRP------NVYLKEIAVNVTALITSSFKAYNLMR 596
+T+ D +++ ID ++N AGI+ P VY + + VNV +LI + A +
Sbjct: 69 KTIVDATVQKFGRIDTLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHII 128
Query: 597 KDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 731
G T++N+SSI G + Y +KSAV QF+ CL +E
Sbjct: 129 TTKG----TVVNVSSINGPCPFPNVTYYCMSKSAVDQFTKCLALE 169
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +3
Query: 435 ETVYDNVIKEHKYIDVVVNCAGIMNDRP------NVYLKEIAVNVTALITSSFKAYNLMR 596
+ + D +++ ID ++N AGI+ P VY + + VNV +LI + A +
Sbjct: 70 KAIVDATVQKFGRIDSLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHII 129
Query: 597 KDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 731
G T++N+SSI G + + Y +KSAV QF+ CL +E
Sbjct: 130 TTKG----TVVNVSSINGPCPFAGVTYYCMSKSAVDQFTKCLALE 170
>Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical
protein C06B3.5 protein.
Length = 349
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Frame = +3
Query: 366 ELNDNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDV--VVNCAGIMNDRPNVYLK-- 533
E+ + Y +V+F D T+ + Y ++ + + + ++N G++ + P K
Sbjct: 90 EIMEKYSNVEVRFATFDFTNPSISD-YKKLLSQLNEVSIGMLINNVGMLFEYPENLHKTV 148
Query: 534 ---EIAVNVTALITS--SFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSA 698
++ NVT L T + + ++ + K G I+NI S+ G + + VY+A+K
Sbjct: 149 GGIDVVANVTILNTLPVTLLSAGILPQMVSRKTGIIVNIGSVAGAAKMAEWSVYSASKKY 208
Query: 699 VLQFSTCLGMEPHYSHSG 752
V + CL E Y H G
Sbjct: 209 VEWLTGCLRKE--YEHQG 224
>U23177-3|AAA64333.2| 316|Caenorhabditis elegans Lethal protein 767
protein.
Length = 316
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Frame = +3
Query: 366 ELNDNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYID--VVVNCAGIMNDRPNVYLK-- 533
E+ + Y +V+ D T N + Y +++ ++ V++N G+ + P+V K
Sbjct: 90 EILEKYSSIEVRTAAFDFT-NAAPSAYKDLLATLNQVEIGVLINNVGMSYEYPDVLHKVD 148
Query: 534 ---EIAVNVTALIT--SSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSA 698
E N+T + T + + ++ + K G I+N+ S G Q +L VY+ATK
Sbjct: 149 GGIERLANITTINTLPPTLLSAGILPQMVARKAGVIVNVGSSAGANQMALWAVYSATKKY 208
Query: 699 VLQFSTCLGMEPHYSHSG 752
V + L E Y H G
Sbjct: 209 VSWLTAILRKE--YEHQG 224
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Frame = +3
Query: 435 ETVYDNVIKEHKYIDVVVNCAG-------IMNDRP-NVYLKEIAVNVTALITSSFKAYNL 590
+ + + +K+ ID+++N AG + D+ ++Y K +N A++ K
Sbjct: 74 DQIIQSAVKKFGKIDILINNAGANVVDGTVNTDQSIDLYHKTFQINFQAVVEMVKKTKKY 133
Query: 591 MRKDHGGKGGTIINISSIVGLFQA-SLLPVYAATKSAVLQFSTCLGME 731
+ + G I+N+SSI QA S+ P YAA K+A+ Q++ C+ ++
Sbjct: 134 LIESKG----EIVNVSSIAAGPQAVSMSPYYAAAKAALNQYTRCVALD 177
>Z77652-8|CAB01114.1| 314|Caenorhabditis elegans Hypothetical
protein C06B3.4 protein.
Length = 314
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Frame = +3
Query: 393 KVKFYKCDVTSNDLETVYDNVIKE--HKYIDVVVNCAGIMNDRPNVYLK-----EIAVNV 551
+V+F D T+ + Y+ ++ + I +++N G+ D P + K + NV
Sbjct: 99 EVRFATFDFTNPSVSD-YEKLLSKLNEVSIGILINNVGMFFDYPEMLHKINGGIDSIANV 157
Query: 552 TALIT--SSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLG 725
T + T ++ + ++ + K G I+NI S+ GL + VY+ATK V + CL
Sbjct: 158 TIINTLPATLLSAGILPQMVPRKAGIIVNIGSVAGLATMAEWSVYSATKKYVEWITGCLQ 217
Query: 726 MEPHYSHSG 752
E Y H G
Sbjct: 218 KE--YGHQG 224
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 39.9 bits (89), Expect = 0.002
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Frame = +3
Query: 300 KEGAK-HIAALDVDSVNGKILEDELNDNYKGNKVKFYKCDVT-SNDLETVYDNVIKEHKY 473
KEGA+ I + D + + + L K+ DVT ++ + + + + +
Sbjct: 28 KEGAQVTITGRNEDRLE-ETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 86
Query: 474 IDVVVNCAGIM-------NDRP-NVYLKEIAVNVTALITSSFKAYNLMRKDHGGKGGTII 629
ID++VN AG D+P +Y K +N A+I + K + K G I+
Sbjct: 87 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKG----EIV 142
Query: 630 NISSIVGLFQA-SLLPVYAATKSAVLQFSTCLGME 731
N+SSIV QA S P YA K+A+ Q++ C ++
Sbjct: 143 NVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 177
>Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical
protein F11A5.12 protein.
Length = 315
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Frame = +3
Query: 393 KVKFYKCDVTSNDLETVYDNVIKEHKYIDV--VVNCAGIMNDRPNVYLK-----EIAVNV 551
+V+F D T N T Y+ ++ + + V ++N G+ D P + K + NV
Sbjct: 99 EVRFATYDFT-NPSVTDYEKLLSKLNEVSVGILINNVGMFFDYPEMLHKINGGIDSIANV 157
Query: 552 TALIT--SSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLG 725
+ T ++ + ++ + K G I+NI S G+ + + +Y+ATK V + CL
Sbjct: 158 IIINTLPATLLSAGILPQMVSRKAGIIVNIGSFAGVVKLAEWSIYSATKKYVEWLTGCLR 217
Query: 726 MEPHYSHSG 752
E YSH G
Sbjct: 218 KE--YSHHG 224
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Frame = +3
Query: 435 ETVYDNVIKEHKYIDVVVNCAGI-MNDRP---------NVYLKEIAVNVTALITSSFKAY 584
+ + ++ I++ +D++VN AG ND +VY K + +N+ +++T + KA
Sbjct: 75 DELVNSTIQKFGRLDILVNNAGAAFNDDQGRVGVDQDVSVYDKIMQINMRSVVTLTQKA- 133
Query: 585 NLMRKDHGGKG-GTIINISSIVGLFQASL-LPVYAATKSAVLQFSTCLGME 731
K+H K G I+N+SSI G A + YA +KSA+ QF+ C ++
Sbjct: 134 ----KEHLVKAKGEIVNVSSIAGTAHAQPGVMYYAMSKSALDQFTRCAAID 180
>AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical
protein Y39A1A.11 protein.
Length = 296
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +3
Query: 378 NYKGNKVKFYKCDVTSNDLETVYDNVIKEH-KYIDVVVNCAGIMNDRPNVYLKEIAVN-- 548
N GN ++ DV+ + IK + V+VNCAGI D + + +
Sbjct: 99 NLPGNGHSAFEIDVSDPEHVARLQEFIKSSGESPSVLVNCAGITKDATLLKMSQNQWQDV 158
Query: 549 VTALITSSFKAYNLMRKDHGGKGG--TIINISSIVGLFQASLLPVYAATKSAVLQFSTCL 722
+ + S F ++ ++ G +I+N+SSIVG YAATKS V+ F+
Sbjct: 159 MNVNLNSVFLMSQMIARESVAAGSPLSIVNVSSIVGKIGNFGQTNYAATKSGVIGFTKSA 218
Query: 723 GME 731
E
Sbjct: 219 ARE 221
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +3
Query: 384 KGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDVVVNCAGIM--------NDRPNVYLKEI 539
K N V C+ + D E + + K K ID++VN AG + + +Y K
Sbjct: 59 KINAVVADVCEASGQD-EVIRTTLAKFGK-IDILVNNAGALLTDGTSNTDQAVELYQKTF 116
Query: 540 AVNVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQAS-LLPVYAATKSAVLQFST 716
+N A++ + K + K G I+N+SSIV QA P YA K+A+ Q++
Sbjct: 117 KLNFQAVVEMTQKTKEYLIKTKG----EIVNVSSIVAGPQAQPASPYYACAKAALDQYTR 172
Query: 717 CLGME 731
C ++
Sbjct: 173 CTAID 177
>AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily
assigned gene nameprotein 57 protein.
Length = 314
Score = 35.9 bits (79), Expect = 0.031
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 366 ELNDNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDV--VVNCAGIMNDRPNVYLK-- 533
++ + Y +V++ CD T E Y ++ +D+ ++N G+ D P V +
Sbjct: 96 QILNKYSDIEVRYAICDFTRVSYED-YKRLLHSLNEVDIGILINNVGMCFDNPEVLHRVE 154
Query: 534 ---EIAVNVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVL 704
+ NV + A ++ + K G I+NI S G + VY+ATK +
Sbjct: 155 GGIDTLTNVINVNILPLTA-GILPQMMARKSGIIVNIGSAAGSIHMAKWSVYSATKKYIE 213
Query: 705 QFSTCLGMEPHYSHSG 752
F++ L E Y + G
Sbjct: 214 WFTSILQKE--YENEG 227
>Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical
protein F01G4.2 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Frame = +3
Query: 402 FYKCDVTSND-LETVYDNVIKEHKYIDVVVNCAGI--------MNDRPNVYLKEIAVNVT 554
F VTS + + + V E+ +D +VNCAGI + + +V ++I +
Sbjct: 57 FTPASVTSEEEVRAAFAKVQAEYGRLDALVNCAGIAYAFKLYSVQKKKHVDFEKIRQTID 116
Query: 555 ALITSSFKAYN----LM---RKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVL 704
+ +F LM KD G+ G +IN +S+ + Y+A+K A++
Sbjct: 117 VNVLGTFNVIRHGVALMGEHEKDANGQRGVVINTASVAAFDGQTGQSAYSASKGAIV 173
>U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical
protein T25G12.2 protein.
Length = 537
Score = 31.9 bits (69), Expect = 0.50
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 390 NKVKFYKCDVTSNDLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKEIAVNVTALITS 569
NK +Y D+T+ D + + + K +DV++N AG M++R + +A++ A+ T+
Sbjct: 131 NKPTYYFFDITNPD-KAPWAQIPK----VDVLINNAG-MSNRGSCQDTTMAIHRKAMETN 184
Query: 570 SFKAYNLMRK--DHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYS 743
F + + G I+ SSI G Y+A+K A+ + CL E
Sbjct: 185 LFGHVQVTQSLLSKLSPDGCIVVTSSIQGKVAIPYRGSYSASKHALQGYFDCLRAEHKNL 244
Query: 744 H 746
H
Sbjct: 245 H 245
>AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical
protein R05D8.7 protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.50
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Frame = +3
Query: 369 LNDNYKGNKVKFYKCDVTSND-LETVYDNVIKEHKYIDVVVNCAGIM----------NDR 515
L +V DVT+ D + + ++ +K+ IDV+VN AG +
Sbjct: 51 LKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQG 110
Query: 516 PNVYLKEIAVNVTALITSSFKAYNLMRKDH-GGKGGTIINISSIVGLFQASL-LPVYAAT 689
++Y K + +N+ A+I + K K H G I+N+SSIV QA YA
Sbjct: 111 IDIYHKTLKLNLQAVIEMTKKV-----KPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIA 165
Query: 690 KSAVLQFS 713
K+A+ Q++
Sbjct: 166 KAALDQYT 173
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 31.1 bits (67), Expect = 0.88
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +3
Query: 474 IDVVVNCAGIMNDRPNVYLKEI------AVNVTALITSSFKAYNLMRKDHGGKGGTIINI 635
ID+V+N AGI+ D + + E+ V+V + A+ MR K G I+
Sbjct: 91 IDIVINNAGILRDVSFLKMTELDWDLIFKVHVKGAYAVTKAAWPYMRDQ---KYGRIVVT 147
Query: 636 SSIVGLFQASLLPVYAATKSAVLQFSTCLGME 731
SS G+ YAA KSA++ S L E
Sbjct: 148 SSNAGVHGNFGQANYAAAKSALIGLSNSLAQE 179
>Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical
protein C01G12.5 protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 519 NVYLKEIAVNVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQAS-LLPVYAATKS 695
+V+ K + +N+ +++T + KA + K G I+N+SSI G A L YA +KS
Sbjct: 112 SVFDKTMRINLRSVVTLTQKAKEHLIKTKG----EIVNVSSIAGGQHAQPELIYYAMSKS 167
Query: 696 AVLQFS 713
A+ Q++
Sbjct: 168 ALDQYT 173
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 29.9 bits (64), Expect = 2.0
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 414 DVTSNDLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKE------IAVNVTA-LITSS 572
DV++N E V +I H I +VN AGI + + + AVNV ++ +
Sbjct: 66 DVSAN--EEVLFKLIVPHFPIHGLVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQ 123
Query: 573 FKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 731
A N + D KG +I+NISS + VY A+K+A+ + CL E
Sbjct: 124 LVARNFV--DRQIKG-SIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANE 173
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 29.9 bits (64), Expect = 2.0
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 414 DVTSNDLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKE------IAVNVTA-LITSS 572
DV++N E V +I H I +VN AGI + + + AVNV ++ +
Sbjct: 66 DVSAN--EEVLFKLIVPHFPIHGLVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQ 123
Query: 573 FKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 731
A N + D KG +I+NISS + VY A+K+A+ + CL E
Sbjct: 124 LVARNFV--DRQIKG-SIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANE 173
>U80439-3|AAB37640.1| 323|Caenorhabditis elegans Dehydrogenases,
short chain protein1 protein.
Length = 323
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 384 KGNKVKFYKCDVTS-NDLETVYDNVIKEHKYIDVVVNCAGIM 506
+ ++ + DVT+ N + D + + KY+ V++N AGIM
Sbjct: 59 EAERIHLFTLDVTNYNSICNFTDEISRMFKYLHVIINNAGIM 100
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Frame = +3
Query: 420 TSNDLETVYDNVIKEHKYIDVVVNCAG--IMNDRPNVYLKEIAVNVTALITSSFKAY-NL 590
T+ + + + + + I++++N AG I + + K N+T + + ++ +
Sbjct: 69 TAEGQDLLISSTLDKFGKINILINNAGANIPDSQGQTRTKCSIENLTKMFQLNLQSVVEM 128
Query: 591 MRK--DHGGKG-GTIINISSI-VGLFQASLLPVYAATKSAVLQFSTCLGME 731
++K H K G I+NISSI G P Y++ K+A+ Q+S C ++
Sbjct: 129 VQKVRPHLAKTRGEIVNISSIGAGPAAQPASPYYSSAKAALDQYSRCAAID 179
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 306 GAKHIAALDVDSVNGKILEDELNDNYKGNKVKFYKCDVTSNDLETVYDNVIKEH 467
GAK I ALD + ++ + E+ ++ V K V S L ++D + H
Sbjct: 984 GAKQIIALDSNGLSDPFVVIEIIPKFRYPAVPVVKTKVVSKSLNPIFDETFEFH 1037
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 381 YKGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDVVVNCAG 500
Y G +V K D D T Y+N+IK Y D + C G
Sbjct: 223 YDG-RVNNAKYDTPKLDYFTNYENLIKNESYYDEGIQCRG 261
>U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,
short chain protein29 protein.
Length = 427
Score = 27.9 bits (59), Expect = 8.2
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = +3
Query: 300 KEGAKHIAALDVDSVNGKILEDELNDNYKGNKVKFYKCDVTSND-LETVYDNVIKEHKYI 476
K AK +A +DV+ G LE +GN KF+ CD++ D ++ + +
Sbjct: 63 KRKAK-VAIIDVNKEGG--LETVKTIAAEGNMAKFWYCDISDVDNMKKTAKEIEDTFGDV 119
Query: 477 DVVVNCAGIMNDRPNVYLKEIAVNVTALITSSFKAYNLMR----KDHGGKGGTIINISSI 644
++V+ A I++ + + + + L + F N +R K G I+ + SI
Sbjct: 120 NIVICNAAILSFTSFMEISDELLR-KCLDVNIFGTINTIRAFLPKMETKNDGHIVCVCSI 178
Query: 645 VGLFQASLLPVYAATKSAVLQFSTCLGME 731
G ++ Y +K AV L ME
Sbjct: 179 AGWSGETMGLSYCTSKFAVRGAMESLQME 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,359
Number of Sequences: 27780
Number of extensions: 273194
Number of successful extensions: 739
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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