Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3h09
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069175-1|AAL39320.1|  285|Drosophila melanogaster GH22096p pro...    56   5e-08
AE013599-2421|AAF57902.1|  285|Drosophila melanogaster CG6984-PA...    56   5e-08
BT028791-1|ABI34172.1|  326|Drosophila melanogaster IP11341p pro...    33   0.53 
AE014297-4149|AAF56726.1|  326|Drosophila melanogaster CG5611-PA...    33   0.53 

>AY069175-1|AAL39320.1|  285|Drosophila melanogaster GH22096p
           protein.
          Length = 285

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 38/45 (84%)
 Frame = +3

Query: 498 NSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKEL 632
           NSLSL+MM  L +A+ K+K+++ LR ++++A+G ++SAGHNLKEL
Sbjct: 54  NSLSLDMMCALQDALLKDKDNLDLRCVVLTAQGKIWSAGHNLKEL 98



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 52  VQKTGSRSLSVLRRFVHN---EYITTTENNGTREITLNHEKT 168
           + K  +  +  + RF  N   + +   E+NG REITLNH KT
Sbjct: 11  ISKYATGCVQQVIRFTSNGPSDLVLVKEHNGVREITLNHPKT 52


>AE013599-2421|AAF57902.1|  285|Drosophila melanogaster CG6984-PA
           protein.
          Length = 285

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 38/45 (84%)
 Frame = +3

Query: 498 NSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKEL 632
           NSLSL+MM  L +A+ K+K+++ LR ++++A+G ++SAGHNLKEL
Sbjct: 54  NSLSLDMMCALQDALLKDKDNLDLRCVVLTAQGKIWSAGHNLKEL 98



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 52  VQKTGSRSLSVLRRFVHN---EYITTTENNGTREITLNHEKT 168
           + K  +  +  + RF  N   + +   E+NG REITLNH KT
Sbjct: 11  ISKYATGCVQQVIRFTSNGPSDLVLVKEHNGVREITLNHPKT 52


>BT028791-1|ABI34172.1|  326|Drosophila melanogaster IP11341p
           protein.
          Length = 326

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 495 RNSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELVSE 641
           RNS+  N    L EAI++ + D +    ++   G  F AG++L+EL +E
Sbjct: 62  RNSIDANTAEQLTEAISQFEADDTSPVGVLYGIGGSFCAGYDLEELEAE 110


>AE014297-4149|AAF56726.1|  326|Drosophila melanogaster CG5611-PA
           protein.
          Length = 326

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 495 RNSLSLNMMNHLIEAINKNKEDISLRAIIISAKGNVFSAGHNLKELVSE 641
           RNS+  N    L EAI++ + D +    ++   G  F AG++L+EL +E
Sbjct: 62  RNSIDANTAEQLTEAISQFEADDTSPVGVLYGIGGSFCAGYDLEELEAE 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,031,557
Number of Sequences: 53049
Number of extensions: 429396
Number of successful extensions: 711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)