Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3h07
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 40 0.002
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.029
AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical ... 33 0.27
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 31 1.1
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 30 1.9
U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm recept... 29 3.3
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 29 3.3
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 29 4.4
AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical ... 29 4.4
U21321-2|AAG00050.1| 489|Caenorhabditis elegans Cytochrome p450... 28 5.8
AF016433-3|AAB65390.1| 336|Caenorhabditis elegans Seven tm rece... 28 5.8
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 28 7.7
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 28 7.7
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 566 TEAKAGDWPWHVAILIRQPKSVVGVYNCGGTIISRRAVLTAGHC 697
+E+ WPW V +L R +G + CGG++I VLTA HC
Sbjct: 62 SESSPHSWPWTVQLLSR-----LGHHRCGGSLIDPNFVLTAAHC 100
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 590 PWHVAILIRQPKSVVGVYNCGGTIISRRAVLTAGHC 697
PW V I ++ K V CGGT+I+ + VLTA HC
Sbjct: 44 PWAVQIRVKARKGDFEVI-CGGTLITLKHVLTAAHC 78
>AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical
protein F25E5.4 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 572 AKAGDWPWHVAILIR-QPKSVVGVYNCGGTIISRRAVLTAGHCLFMNG 712
A+ GD PW V++ ++ S GV+ GT+IS R VLT ++G
Sbjct: 47 ARPGDHPWAVSVYVKANTTSKNGVFLGPGTLISARHVLTFNSIKVVDG 94
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 569 EAKAGDWPWHVAILIRQPKSVVGVYNCGGTIISRRAVLTAGHC 697
E G +PW A+ + K+ ++CG +I+ + ++TA HC
Sbjct: 32 ETVPGAFPWTAALRNKATKA----HHCGASILDKTHLITAAHC 70
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 548 ELTSVRTEAKAGDWPWHVAILIRQPKSVVGVYNCGGTIISRRAVLTAGH 694
E ++ E+K ++PW V+ +V GV GG+IIS ++TA H
Sbjct: 15 ESCGIQQESKIKNFPWAVSF------TVDGVNRLGGSIISPYHIITAAH 57
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 602 AILIRQPKSVVGVYNCGGTIISRRAVLTAGHCLF 703
+++ R P V CGG +I+ V+T+ HC+F
Sbjct: 33 SVITRFPDGTTNV--CGGVLIAPSIVITSAHCVF 64
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 569 EAKAGDWPWHVAILIRQPKSVVGVYNCGGTIISRRAVLTAGHC 697
+A + PW V + K C GTI+S R +L A HC
Sbjct: 168 DASQSEAPWSVFTYLYS-KDEQSATTCTGTIVSPRHILIATHC 209
>U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm receptor
protein 146 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 176 WRAVVDFGLYNNLEKVEMEVYFEKEIK--INKASQNTTFVVV 295
W A V FG++N++EK ++Y + E+K N+ S F+ V
Sbjct: 141 WYAFVYFGMHNSIEK---QLYLKDELKTVYNEDSTKVAFIAV 179
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 200 LYNNLEKVEMEVYFEKEIKINKASQNTTFVVVRNNWHHIIIRPIGPLQERFTFDLNIRNS 379
LY + K+ VY I + K + F V N + + I+ GPL E +FD + N+
Sbjct: 265 LYGKIPKI---VYIAMRITLQKMYSSVNFEV--ENDYRMKIKCEGPLPENKSFDEQLLNA 319
Query: 380 SGND 391
ND
Sbjct: 320 QLND 323
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 569 EAKAGDWPWHVAI-LIRQPKSVVGVYN--CGGTIISRRAVLTAGHC 697
+A+ + PW V I K++ ++ C GT+ S R +LTA HC
Sbjct: 46 KAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91
>AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical
protein C04E12.10 protein.
Length = 658
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 454 GLDFIITKNHFVDGEH 407
GL F++ +NHFV GEH
Sbjct: 142 GLQFVVGQNHFVMGEH 157
>U21321-2|AAG00050.1| 489|Caenorhabditis elegans Cytochrome p450
family protein 44A1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 5.8
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 194 FGLYNNLEKVEMEVYFEKEIKINKASQNTTFV--VVRNNWHHIIIRPIGPLQERFTFDLN 367
+ LYN E +KEIK + AS TF+ ++ + + PIG R T N
Sbjct: 321 YNLYNLATHPEALKEIQKEIKEDPASSKLTFLRACIKETFR---MFPIGTEVSRVT-QKN 376
Query: 368 IRNSSGNDVPVVTMFSINKVILCNDEI 448
+ SG +VP T IN +L E+
Sbjct: 377 L-ILSGYEVPAGTAVDINTNVLMRHEV 402
>AF016433-3|AAB65390.1| 336|Caenorhabditis elegans Seven tm
receptor protein 144 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +2
Query: 137 LGIIYFDNVKGFD-WRAVVDFGLYNNLEKVEM--EVYFEK-EIKINKAS 271
LG+I+ + F W A V FG++N +EK + +V FE E+ I++ S
Sbjct: 132 LGLIFIPCIVCFVLWFACVYFGMHNTIEKQQFMRDVMFENYEVDISRES 180
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 386 NDVPVVTMFSINKVILCNDEIKARQKTSSYDITHKYNGGKKYAHVCGRRSLENTELTSVR 565
ND+ + + ++V+ CN ++ S Y I +Y+ Y C +S N EL ++
Sbjct: 37 NDLVCYSKYDKSRVVRCNSACVQKRIVSRYKINSEYDFDFYYRVGCESKSF-NPELQKLQ 95
Query: 566 TEAK 577
K
Sbjct: 96 CSVK 99
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 418 DGEHRYDGYIVSTRISYIQIKRE 350
+GE R+DGY + T+I Y K +
Sbjct: 1413 EGEVRFDGYTIKTKIPYYSRKNQ 1435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,019
Number of Sequences: 27780
Number of extensions: 370831
Number of successful extensions: 1096
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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