Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3h06
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0125 + 31850858-31850905,31851032-31851109,31851221-318513... 31 1.2
12_02_1113 - 26165074-26165889,26166077-26166202,26166294-261664... 30 2.1
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 30 2.1
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994... 29 2.8
06_02_0236 + 13331024-13331264,13333164-13333744 29 3.6
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 29 3.6
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 4.8
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 4.8
08_02_0128 - 12848227-12848619,12848699-12848827,12849108-128492... 28 6.4
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 28 6.4
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 28 6.4
12_02_1168 + 26651863-26651974,26652087-26652290,26652392-266525... 28 8.4
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 28 8.4
>03_06_0125 +
31850858-31850905,31851032-31851109,31851221-31851337,
31851346-31851642,31852498-31852509,31852737-31852822,
31853516-31853660,31853767-31853862,31854333-31854424,
31854696-31854797,31854891-31855037,31855116-31855266,
31855418-31855480,31855570-31855806,31856081-31856185,
31856263-31856376,31856459-31857037,31857279-31857286,
31857858-31858004,31858077-31858203
Length = 916
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/86 (20%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +3
Query: 339 NILKQKSKERLLKSGIPQTNVGKSEI-INEHVNLFANLEDAI-----KTTNKEHDKEVKA 500
N LK + + +K+ + + N+G + + ++ + NL+ + + KEH VK
Sbjct: 441 NTLKYADRAKEIKTHVHK-NIGHLDTHVEDYKRMIDNLQVEVSQLKKELAEKEHQLSVKP 499
Query: 501 KQEEYEKQIGYLTYLGQDTNEALKKK 578
++ + ++ +L L Q+T E ++++
Sbjct: 500 TEKAADNELSWLNILSQETGENVQER 525
>12_02_1113 -
26165074-26165889,26166077-26166202,26166294-26166457,
26166539-26166576,26166670-26166885,26166984-26167145,
26167212-26167497,26167585-26167761,26167864-26167971,
26168076-26168175,26168283-26168359,26168608-26168803,
26169032-26169363,26169476-26169589,26169651-26169753
Length = 1004
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 417 INEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQI 527
I +HVN +A+LE K ++ +E K +++ Y K I
Sbjct: 304 IQQHVNQYASLECEFKDLKEKFTEETKERKDLYNKLI 340
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 393 TNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNE-AL 569
++VG + N + NL N E A+ + E ++ G++T L T+E AL
Sbjct: 1639 SDVGTARNTNHNTNLSLNHETAVPLSRSSG---------EASRKHGFITDLNVATSEEAL 1689
Query: 570 -KKKNWYDVPPEASRYSRTNDIKDTYNKL 653
KNW A+R S+ N +D Y+++
Sbjct: 1690 GNTKNWNPYAGNANRGSQRNHHRDRYSQI 1718
>10_08_0460 -
18098187-18098248,18098331-18098399,18098468-18099434,
18100089-18100808,18100942-18101031,18101076-18101138,
18101223-18101366,18101471-18101527,18101606-18101680,
18101757-18101836,18101937-18102050,18102166-18102258,
18102470-18102553,18102812-18102859,18105207-18105337,
18105903-18106135
Length = 1009
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +3
Query: 453 DAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDI 632
D++ + EH+ E + LG D + ++ W D E+ S+ D+
Sbjct: 29 DSVHGCDGEHNYEPPCDNNIVDASPAVWDALGLDKSVGMEHITWSDDGDESKVRSKKIDM 88
Query: 633 KDTYNKLVLKDEDGKPKNKL 692
+ K K E+ +PK+K+
Sbjct: 89 ESEKKKAKKKREEEEPKSKI 108
>06_02_0236 + 13331024-13331264,13333164-13333744
Length = 273
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 399 VGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYL---TYLGQD--TNE 563
+GK + N+ V+ E ++ TNK K ++E +KQI ++ ++ G+ E
Sbjct: 138 LGKKQSKNKQVS--QGEEQKVENTNKPWKKFKHDYKQERKKQINFIGDGSHNGEGFFRQE 195
Query: 564 ALKKKNWYDVPPEASRYSRTNDIKDTYNKLVLKDEDG 674
K NW + S + +++D L ++EDG
Sbjct: 196 GKGKNNWDNSKGGKSYWGNLVEVEDNDGILSKEEEDG 232
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +3
Query: 384 IPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQ--DT 557
+ ++N E + EHV L IK + +H+KE+K K+I TY+ Q
Sbjct: 219 LEKSNAELREQLEEHVVTIETLRTQIKISEAQHEKELKEL-----KEITSSTYVDQAKSL 273
Query: 558 NEALKKKNWYDVPPEASRYSRTNDIKDTYNKL 653
+ L+ K S N IKD +L
Sbjct: 274 QQTLEYKQKQIDSLSTSNTELQNSIKDLDERL 305
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +3
Query: 312 ETADKESRLNILKQKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKE 491
E +K + ++ E+ ++G + + +N N A+ +D + T K+++KE
Sbjct: 149 ENGEKHEENGEKQNENGEKCEENGGKPAQISDDQAVNG-CNGSADKKDKEEETEKDNEKE 207
Query: 492 VKAKQEEYEK 521
+ K+EE EK
Sbjct: 208 KEDKEEETEK 217
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 450 EDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTND 629
ED + T K+++KE + K+EE +K T+E K+K D E +
Sbjct: 209 EDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEK--LEEEE 266
Query: 630 IKDTYNKLVLKDEDGKPKN 686
KD KL K+++ + +N
Sbjct: 267 KKDKEEKLEEKEKENEEEN 285
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 450 EDAIKTTNKEHDKEVKAKQEEYEK 521
E+ IK K+ +KE KAKQE+ EK
Sbjct: 538 EELIKEEEKKKEKEEKAKQEKEEK 561
>08_02_0128 - 12848227-12848619,12848699-12848827,12849108-12849279,
12849336-12849488,12850017-12850271,12850846-12851000,
12853319-12853456,12853545-12853715,12853878-12854063,
12854169-12854290,12855617-12855752,12856108-12856203,
12856294-12856356,12856846-12856993,12857324-12857514,
12857916-12857989,12858039-12858171,12858299-12858460,
12861649-12861745,12861866-12861962,12863994-12864141
Length = 1072
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -2
Query: 631 MSLVREYLEASGGTS-YQFFFFKASFVSCPR*VK*PICFSYSSCLAFTSLSCSLFVVLIA 455
M L +E +EA GGT Y FF F K C +Y+ ++L +LF ++
Sbjct: 827 MKLCKEMVEAMGGTERYLFFACDFHFSEYYARFKSYCCEAYNILRKSSNLILNLFYLMTG 886
Query: 454 SS--RFANKLTCSFIISLFP 401
S+ +K T F +S P
Sbjct: 887 SNIESITDKGTSKFPMSTHP 906
>04_01_0097 -
998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 447 LEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKK 578
L+ A KT + E +KEV A + E + L + D + LKKK
Sbjct: 174 LKHAYKTLSSEKEKEVSALRAENDFVWNQLRTMENDYTDLLKKK 217
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 420 NEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYL 545
NEH L L ++ +E +E+KAKQ +YEK + ++ L
Sbjct: 730 NEHHKL-GELVKKLEQELQESKQELKAKQAQYEKSVSTVSEL 770
>12_02_1168 +
26651863-26651974,26652087-26652290,26652392-26652542,
26653355-26653399,26653528-26653598,26653678-26653763,
26653976-26654078,26654300-26654406
Length = 292
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +3
Query: 378 SGIPQTNVGKSEIINEHVNLFANLEDAI--KTTNKE-HDKE--VKAKQEEYEKQIGYLTY 542
SG + K E + + N + E I K TN + +D + +KA +EEYEK Y+
Sbjct: 159 SGSTEILYRKPESVADVENKVNDAESMIPPKETNGQGNDAQGAIKASKEEYEKLPPYMKT 218
Query: 543 LG--QDTNEALKKKNWY 587
L ++ EA+ K N Y
Sbjct: 219 LATWEELQEAISKLNSY 235
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -3
Query: 564 LHLYLVQDKLNSQFVFHILLVWPLPLYHV 478
LH+ +VQ++L ++ ++++ P +YHV
Sbjct: 370 LHMEIVQERLEREYNLNLIITAPSVVYHV 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,082,321
Number of Sequences: 37544
Number of extensions: 222362
Number of successful extensions: 681
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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