Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3h06
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014986-1|AAH14986.1| 264|Homo sapiens leukocyte receptor clus... 76 1e-13
AF211966-1|AAG01393.1| 206|Homo sapiens LENG1 protein protein. 50 1e-05
BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein. 31 5.4
AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF450485-1|AAP97679.1| 731|Homo sapiens unknown protein. 31 5.4
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 30 7.1
AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein pr... 30 7.1
BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein. 30 9.4
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 30 9.4
>BC014986-1|AAH14986.1| 264|Homo sapiens leukocyte receptor cluster
(LRC) member 1 protein.
Length = 264
Score = 75.8 bits (178), Expect = 1e-13
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Frame = +3
Query: 198 MNILPKKRWHVRTKENIXXXXXXXXXXXXXXXXXXXXTETADKESRLNILKQKSKERLLK 377
MNILPKK WHVR K+N+ A +E+R L++K++ +
Sbjct: 1 MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARHQ--- 57
Query: 378 SGIPQTNVGKSEIINEH-VNLFANLEDAIKTT---NKEHDKEVKAKQEEYEKQIGYLTYL 545
+ +P+ ++ V+LF L + K NKE+++E + ++E EK +G LTYL
Sbjct: 58 NSLPELEAAEAGAPGSGPVDLFRELLEEGKGVIRGNKEYEEEKRQEKERQEKALGILTYL 117
Query: 546 GQDTNEALKKKNWYDVPP 599
GQ EA + WY +PP
Sbjct: 118 GQSAAEAQTQPPWYQLPP 135
>AF211966-1|AAG01393.1| 206|Homo sapiens LENG1 protein protein.
Length = 206
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 471 NKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPP 599
NKE+++E + ++E EK +G LTYLGQ EA + WY +PP
Sbjct: 35 NKEYEEEKRQEKERQEKALGILTYLGQSAAEAQTQPPWYQLPP 77
>BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.
Length = 1081
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 519 KQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDIK 635
+ +GY T +G++ E L+K VPPE + +S+ +K
Sbjct: 692 RNVGYSTLIGREKTEPLQKMPEGRVPPERNLFSQDISVK 730
>AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens
cDNA FLJ33811 fis, clone CTONG2002095. ).
Length = 1077
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 519 KQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDIK 635
+ +GY T +G++ E L+K VPPE + +S+ +K
Sbjct: 692 RNVGYSTLIGREKTEPLQKMPEGRVPPERNLFSQDISVK 730
>AF450485-1|AAP97679.1| 731|Homo sapiens unknown protein.
Length = 731
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 519 KQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDIK 635
+ +GY T +G++ E L+K VPPE + +S+ +K
Sbjct: 342 RNVGYSTLIGREKTEPLQKMPEGRVPPERNLFSQDISVK 380
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 30.3 bits (65), Expect = 7.1
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 384 IPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVK 497
+ Q N K ++ +H NLE ++ N EH+ +++
Sbjct: 634 LQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQ 671
>AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein
protein.
Length = 590
Score = 30.3 bits (65), Expect = 7.1
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 384 IPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVK 497
+ Q N K ++ +H NLE ++ N EH+ +++
Sbjct: 311 LQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQ 348
>BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein.
Length = 749
Score = 29.9 bits (64), Expect = 9.4
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +3
Query: 438 FANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYS 617
F +L+D I+ E D ++ QEE + Q L D++E +KK +Y + A +
Sbjct: 294 FQDLKDTIERAKNEADLLLEDLQEEIDLQSSVLNASIADSSENIKK--YYHISSSAEK-- 349
Query: 618 RTNDIKDTYN 647
+ N+ T N
Sbjct: 350 KINETSSTIN 359
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 29.9 bits (64), Expect = 9.4
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +3
Query: 438 FANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYS 617
F +L+D I+ E D ++ QEE + Q L D++E +KK +Y + A +
Sbjct: 1268 FQDLKDTIERAKNEADLLLEDLQEEIDLQSSVLNASIADSSENIKK--YYHISSSAEK-- 1323
Query: 618 RTNDIKDTYN 647
+ N+ T N
Sbjct: 1324 KINETSSTIN 1333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,963,802
Number of Sequences: 237096
Number of extensions: 1258910
Number of successful extensions: 7316
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7314
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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