Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3h06
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1136|AAF54521.1|  288|Drosophila melanogaster CG12818-P...   123   3e-28
AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p pro...    37   0.024
AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-P...    37   0.024
AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p pro...    33   0.38 
BT010072-1|AAQ22541.1|  882|Drosophila melanogaster LD12453p pro...    30   2.7  
BT001617-1|AAN71372.1| 1044|Drosophila melanogaster RE34950p pro...    30   2.7  
AY058651-1|AAL13880.1|  606|Drosophila melanogaster LD35285p pro...    30   2.7  
AE014296-1012|AAF50744.2| 1044|Drosophila melanogaster CG10542-P...    30   2.7  
AE013599-1653|AAZ52808.1|  882|Drosophila melanogaster CG32904-P...    30   2.7  
AE014296-2186|AAF49883.1|  697|Drosophila melanogaster CG10969-P...    29   6.2  
AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-P...    29   8.2  

>AE014297-1136|AAF54521.1|  288|Drosophila melanogaster CG12818-PA
           protein.
          Length = 288

 Score =  123 bits (296), Expect = 3e-28
 Identities = 64/137 (46%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
 Frame = +3

Query: 198 MNILPKKRWHVRTKENIXXXXXXXXXXXXXXXXXXXXTETADKESRLNILKQKS--KERL 371
           MNILPKKRWHVRTKENI                     E A+ E+R+N L+++S   E+ 
Sbjct: 1   MNILPKKRWHVRTKENIARVRRDQAAAAAEEKVRQEKLEFAESEARINFLRRQSGLPEKA 60

Query: 372 LKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQ 551
            K    ++    S    + V+LFA+ +  +KTTNK+ +KE K +QE+YEKQIGYLTYLGQ
Sbjct: 61  SKESREESQC--STETTKGVDLFADYKARVKTTNKDLEKEQKEEQEKYEKQIGYLTYLGQ 118

Query: 552 DTNEALKKKNWYDVPPE 602
           DTNEALK ++WY++ P+
Sbjct: 119 DTNEALKVRSWYELAPK 135


>AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p
           protein.
          Length = 1059

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 345 LKQKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQ 506
           LK+K K+  L  G       K  + NE +NL    E+ ++ TN++H K+++  Q
Sbjct: 343 LKKKGKDHRLTGGFASNQSDKHNL-NERLNLLTRREEELQATNEKHKKKIQKMQ 395


>AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-PA
           protein.
          Length = 1059

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 345 LKQKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQ 506
           LK+K K+  L  G       K  + NE +NL    E+ ++ TN++H K+++  Q
Sbjct: 343 LKKKGKDHRLTGGFASNQSDKHNL-NERLNLLTRREEELQATNEKHKKKIQKMQ 395


>AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p
           protein.
          Length = 486

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +3

Query: 462 KTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPE-ASRY---SRTND 629
           K  N++  K++ A  E + K+  Y+ YLG     ++KK  W  +PP+ AS+Y   S  + 
Sbjct: 16  KVKNEDDWKQL-APFEGFNKEGEYVGYLGS----SIKKLEWVPLPPKAASQYLLCSVRSK 70

Query: 630 IKDTYNKLVLKDEDG 674
           +K       LKDEDG
Sbjct: 71  MKTFARHKKLKDEDG 85


>BT010072-1|AAQ22541.1|  882|Drosophila melanogaster LD12453p
           protein.
          Length = 882

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +3

Query: 393 TNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQD 554
           T +  S I+  H N   N  D +  T ++  ++ + +Q++ ++   Y+T  G+D
Sbjct: 127 TTISSSSIL--HTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHYHYITTTGED 178


>BT001617-1|AAN71372.1| 1044|Drosophila melanogaster RE34950p
           protein.
          Length = 1044

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = +3

Query: 453 DAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDI 632
           + IK  N    KE  +       Q    T  G DTN A+K++N      EA   +   D+
Sbjct: 552 EEIKQENSTGVKEENSNNVSASGQTNQ-TNSGNDTNVAIKEENHISAEDEADDEASGKDV 610

Query: 633 KDTYNKLVLKDEDGKPKNK 689
           KD   +  L   D     K
Sbjct: 611 KDGIKQEKLSSGDAAAAEK 629


>AY058651-1|AAL13880.1|  606|Drosophila melanogaster LD35285p
           protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = +3

Query: 453 DAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDI 632
           + IK  N    KE  +       Q    T  G DTN A+K++N      EA   +   D+
Sbjct: 114 EEIKQENSTGVKEENSNNVSASGQTNQ-TNSGNDTNVAIKEENHISAEDEADDEASGKDV 172

Query: 633 KDTYNKLVLKDEDGKPKNK 689
           KD   +  L   D     K
Sbjct: 173 KDGIKQEKLSSGDAAAAEK 191


>AE014296-1012|AAF50744.2| 1044|Drosophila melanogaster CG10542-PA
           protein.
          Length = 1044

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = +3

Query: 453 DAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASRYSRTNDI 632
           + IK  N    KE  +       Q    T  G DTN A+K++N      EA   +   D+
Sbjct: 552 EEIKQENSTGVKEENSNNVSASGQTNQ-TNSGNDTNVAIKEENHISAEDEADDEASGKDV 610

Query: 633 KDTYNKLVLKDEDGKPKNK 689
           KD   +  L   D     K
Sbjct: 611 KDGIKQEKLSSGDAAAAEK 629


>AE013599-1653|AAZ52808.1|  882|Drosophila melanogaster CG32904-PA,
           isoform A protein.
          Length = 882

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +3

Query: 393 TNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQD 554
           T +  S I+  H N   N  D +  T ++  ++ + +Q++ ++   Y+T  G+D
Sbjct: 127 TTISSSSIL--HTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHYHYITTTGED 178


>AE014296-2186|AAF49883.1|  697|Drosophila melanogaster CG10969-PA
           protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = +3

Query: 348 KQKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQI 527
           K K+  RL K+G+P   V   +  N      + +  A K  N+    + K+++EE+ K  
Sbjct: 89  KPKASVRL-KAGMPVKPVLGGDPPNSKTPGQSMMASA-KRRNESPTVKAKSREEEFNK-- 144

Query: 528 GYLTYLGQDTNEA-LKKKNWYDVP---PEASRYSRTNDIKDTYNKLVLKDEDGKPKNK 689
             +  L  + + A  ++K +  +P   P  +  ++  ++KDT N +    E+ KP+ K
Sbjct: 145 --IPELVSEASVAKAREKEFEKIPSGVPSLTEENKQTEVKDTNNSIPETHENLKPETK 200


>AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-PA
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = +3

Query: 516 EKQIGYLTYLGQDTNEALKKKNWYDVPPE-ASRY---SRTNDIKDTYNKLVLKDEDG 674
           +K   Y+ YLG     ++KK  W  +PP+ AS+Y   S  + +K       LKDEDG
Sbjct: 65  KKVCEYVGYLGS----SIKKLEWVPLPPKAASQYLLCSVRSKMKTFARHKKLKDEDG 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,498,016
Number of Sequences: 53049
Number of extensions: 408697
Number of successful extensions: 1306
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)