Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3g22
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 33 0.14
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 33 0.14
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 33 0.24
Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 30 1.7
AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.7
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 29 2.3
U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical p... 29 3.9
Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 6.9
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 28 6.9
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 28 6.9
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -1
Query: 599 GWVIGWGGQPG*C-----TPTTSS*LGGAIHSYLGGGGKLEGLTYIVGSVCSSDGRARVP 435
G+VIG G QPG +PT + +GG + Y GGGG G+ G C+S+ R
Sbjct: 18 GYVIGGGTQPGGNQNNPNSPTYNGGIGGGV--YPGGGGNNGGVQRDEGGYCNSNTDCRSG 75
Query: 434 TY 429
Y
Sbjct: 76 LY 77
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -1
Query: 599 GWVIGWGGQPG*C-----TPTTSS*LGGAIHSYLGGGGKLEGLTYIVGSVCSSDGRARVP 435
G+VIG G QPG +PT + +GG + Y GGGG G+ G C+S+ R
Sbjct: 18 GYVIGGGTQPGGNQNNPNSPTYNGGIGGGV--YPGGGGNNGGVQRDEGGYCNSNTDCRSG 75
Query: 434 TY 429
Y
Sbjct: 76 LY 77
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 484 VSPSNLPPPPKYECMAPP 537
+SPS +PPPP+Y APP
Sbjct: 211 MSPSGMPPPPRYTAYAPP 228
>Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical
protein K09E9.2 protein.
Length = 380
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 315 IAWSIAYVPVNHYRCSEDILDNLQKLRAKDAQHAAEEGICRNSCASV 455
I+ S + +N + S + D +Q+++ AA +GIC N+C V
Sbjct: 116 ISESAQKIEINQNKTSVETTDVIQEVKCGSCYGAAADGICCNTCDDV 162
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 499 LPPPPKYECMAPPSYEEVVGVHYPGCPP 582
+P P +E M PP ++ VH+ CPP
Sbjct: 474 IPIPEDFELMTPPGEPDMDFVHFQICPP 501
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 499 LPPPPKYECMAPPSYEEVVGVHYPGCPP 582
+P P +E M PP ++ VH+ CPP
Sbjct: 474 IPIPEDFELMTPPGEPDMDFVHFQICPP 501
>AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical
protein T22D1.4 protein.
Length = 586
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 376 TIYRSLGQKT--RNTQQRRVYVGTRARPSLEQTEPTIYVSPSNLP 504
++Y ++ QKT R TQ ++ T PS ++TE IY N+P
Sbjct: 145 SLYETVTQKTTIRTTQGGKLLSATTVSPSKQETERVIYGPYVNIP 189
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 427 VYVGTRARPSLEQTEPTIYVSPSNLPPPPKYECMAPPSYEEVVGVHYPG-CPPQP 588
V +G + + T + Y +PS PPPPK + + PP ++ V YP PP P
Sbjct: 356 VPLGAQPSTTSSTTYSSNYSNPS-YPPPPKVD-LPPPGIVQLDRVVYPPVSPPSP 408
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical protein
R09E10.5 protein.
Length = 1459
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 355 VVLRISWTIYRSLGQKTRNTQQRRVYVGTRARPSLEQTEPTIYVSPSNLPPPPKYECMAP 534
++ + W I R Q++RN Y + +T+P+ +S +L P+ M P
Sbjct: 1364 LIFLVFWCIKRKKLQESRNYSGTAAYSNNAFQNQTYETKPSRALSVGDLSTAPRTVAMPP 1423
Query: 535 P 537
P
Sbjct: 1424 P 1424
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +1
Query: 502 PPPPKYECMAPPSYEEVVGVHY--PGCPPQPITQ 597
PPPP Y +PP H P PP+P+ +
Sbjct: 587 PPPPPYAPPSPPRASSAAAAHQQPPPLPPKPLAR 620
>U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical
protein F49E8.6 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 472 PTIYVSPSNLPPPPKYE 522
PT+ S NLPPPP YE
Sbjct: 139 PTLPTSSGNLPPPPTYE 155
>Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical
protein C41G6.14 protein.
Length = 322
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 85 EYSNFKSKMERAKIYSKYRSSAVPLVFN*LNCV*LI-HFGRV 207
EYSN + ++ + I+ Y S A+ +VFN L LI H GR+
Sbjct: 3 EYSNIEFEVPQFLIHHYYISGAIAVVFNCLVIYFLIFHSGRI 44
>Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical
protein F20G2.6b protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 427 VYVGTRARPSLEQTEPTIYVSPSNLPPPPKYECMAPPSYEEVVGVHYPGCPPQP 588
VYV A P + +P + L PP Y PPSY ++ +P P P
Sbjct: 146 VYVPPYAAPLMSLRDPRQFQGLPGLAAPPPYP--PPPSYHQISS--FPELPSAP 195
>Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical
protein F20G2.6a protein.
Length = 170
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 427 VYVGTRARPSLEQTEPTIYVSPSNLPPPPKYECMAPPSYEEVVGVHYPGCPPQP 588
VYV A P + +P + L PP Y PPSY ++ +P P P
Sbjct: 98 VYVPPYAAPLMSLRDPRQFQGLPGLAAPPPYP--PPPSYHQISS--FPELPSAP 147
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Frame = +1
Query: 490 PSNLPPPPKYECMAPPS----YEEVVGVHYPGC----PPQPITQP 600
P+ PPPP+ C+ PP ++ P C PPQP QP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Frame = +1
Query: 490 PSNLPPPPKYECMAPPS----YEEVVGVHYPGC----PPQPITQP 600
P+ PPPP+ C+ PP ++ P C PPQP QP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Frame = +1
Query: 490 PSNLPPPPKYECMAPPS----YEEVVGVHYPGC----PPQPITQP 600
P+ PPPP+ C+ PP ++ P C PPQP QP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 502 PPPPKYECMAPPSYEEVVGVHYPGCPPQPITQP 600
PPPP + PP+ + V P P P+T P
Sbjct: 199 PPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAP 231
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 446 RVRH*NRRSLLYMSVPPICRHLPNMSV 526
RV++ NRR +L +SV P+ R NM++
Sbjct: 1243 RVQNENRRVVLQLSVEPLSRQYMNMTI 1269
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +1
Query: 421 RRVYVGTRARPSLEQTEPTIYVSPSNLPPPPKYECMAPPSYEEVVGVHYPGCPPQP 588
++V AR + T PS LPP AP + YP PP P
Sbjct: 21 KKVRENQAAREMAREPLVTHLPPPSGLPPMVSESYSAPYAQAPPTSTGYPSAPPMP 76
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 494 EGLTYIVGSVCSSDGRARVPTYTLLCCVLRVFCP 393
+ + I S+C+ + ++R +Y LC L ++CP
Sbjct: 452 DSIENITHSLCTKEFQSRRSSYYWLCNALDIYCP 485
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 493 SNLPPPPKYECMAPPSYEEVVGVHYPGCPP 582
S LPPPP CM PP + + P PP
Sbjct: 240 SCLPPPPSPVCMPPPPPPCPMPIPCPPPPP 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,770,878
Number of Sequences: 27780
Number of extensions: 301032
Number of successful extensions: 1071
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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