Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3g16
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13293-1|CAA31655.1| 700|Homo sapiens protein ( Human mRNA for ... 31 4.6
BC053555-1|AAH53555.1| 700|Homo sapiens v-myb myeloblastosis vi... 31 4.6
BC007585-1|AAH07585.1| 700|Homo sapiens v-myb myeloblastosis vi... 31 4.6
AL121886-2|CAC08392.1| 700|Homo sapiens v-myb myeloblastosis vi... 31 4.6
AK223482-1|BAD97202.1| 700|Homo sapiens MYB-related protein B v... 31 4.6
AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AL158069-1|CAD18889.1| 472|Homo sapiens transmembrane protein 2... 30 8.0
AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein p... 30 8.0
AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and h... 30 8.0
AF087142-1|AAC62086.1| 473|Homo sapiens TED protein protein. 30 8.0
>X13293-1|CAA31655.1| 700|Homo sapiens protein ( Human mRNA for
B-myb gene. ).
Length = 700
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 5 LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
L VT +TS+SFL NSLT S V LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459
>BC053555-1|AAH53555.1| 700|Homo sapiens v-myb myeloblastosis viral
oncogene homolog (avian)-like 2 protein.
Length = 700
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 5 LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
L VT +TS+SFL NSLT S V LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459
>BC007585-1|AAH07585.1| 700|Homo sapiens v-myb myeloblastosis viral
oncogene homolog (avian)-like 2 protein.
Length = 700
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 5 LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
L VT +TS+SFL NSLT S V LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459
>AL121886-2|CAC08392.1| 700|Homo sapiens v-myb myeloblastosis viral
oncogene homolog (avian)-like 2 protein.
Length = 700
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 5 LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
L VT +TS+SFL NSLT S V LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459
>AK223482-1|BAD97202.1| 700|Homo sapiens MYB-related protein B
variant protein.
Length = 700
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 5 LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
L VT +TS+SFL NSLT S V LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459
>AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AL158069-1|CAD18889.1| 472|Homo sapiens transmembrane protein 28
protein.
Length = 472
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 517 AGALLICAAMCCWLQSPARQP--QNERA 594
A AL IC CCW P+ +P +ERA
Sbjct: 13 AAALTICCCCCCWAPRPSDKPCADSERA 40
>AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein
protein.
Length = 105
Score = 30.3 bits (65), Expect = 8.0
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 415 YGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQPQ 582
+G +LL G LG A V G V L +CCW PAR P+
Sbjct: 2 HGALLLLRGLGFLLLGRARGDVVVVAVAGRVLTVLVVALPPRTLCCWTSPPARPPR 57
>AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 514 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 687
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 688 VAGAPPTYDDAI-KLN--PARLVAGVXQR 765
V G + K+N P +L+ GV +R
Sbjct: 3925 VVGEDMRMKVMLGKVNQCPHQLMNGVSRR 3953
>AF087142-1|AAC62086.1| 473|Homo sapiens TED protein protein.
Length = 473
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 517 AGALLICAAMCCWLQSPARQP--QNERA 594
A AL IC CCW P+ +P +ERA
Sbjct: 13 AAALTICCCCCCWAPRPSDKPCADSERA 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,198,955
Number of Sequences: 237096
Number of extensions: 2228475
Number of successful extensions: 5439
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5438
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -