Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3g12
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-8|AAA62544.1|  662|Caenorhabditis elegans Abnormal embroy...    92   3e-19
AY079165-1|AAL86012.1|  585|Caenorhabditis elegans NADPH-depende...    37   0.014
AL132858-12|CAB60480.1|  585|Caenorhabditis elegans Hypothetical...    37   0.014
AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U21322-8|AAA62544.1|  662|Caenorhabditis elegans Abnormal
           embroygenesis protein 8 protein.
          Length = 662

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
 Frame = +1

Query: 394 TFDIIVLALLLGGTIWWFY----NSKKESKRDKILLEKYSIQAAGSIQVTENSFITKLKT 561
           T D++VL LL GG I + +    N +  S R    +   +  AA S   +  SFI ++K 
Sbjct: 11  TSDLVVLTLLAGGAIIFLFMKVFNQQPSSSRYSPTVASVTTSAAAS--KSNQSFIDRMKN 68

Query: 562 SGRSLVVFYGSQTGTAEEFAGRLAKEGMRYKMKGMVADPEECDMEELTKLQEIENSLAV 738
             R +++ YGSQTGTAEE +GRLAK+  RY  K +V DPE+ + E+L +L E+E++L V
Sbjct: 69  ENRQVLIMYGSQTGTAEEMSGRLAKDLTRYTKKAVVVDPEDIECEDLNRLSEVEDALLV 127


>AY079165-1|AAL86012.1|  585|Caenorhabditis elegans NADPH-dependent
           flavin reductase protein.
          Length = 585

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +1

Query: 571 SLVVFYGSQTGTAEEFAGRLAKEGMRYKMKGMVADPEECDMEEL 702
           S+ + YGS+TGTA++ A  L +E  +  ++  V + +E D+ +L
Sbjct: 2   SIAILYGSETGTAQDIAESLRREAQQRHLQARVHELDEYDVSQL 45


>AL132858-12|CAB60480.1|  585|Caenorhabditis elegans Hypothetical
           protein Y113G7A.8 protein.
          Length = 585

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +1

Query: 571 SLVVFYGSQTGTAEEFAGRLAKEGMRYKMKGMVADPEECDMEEL 702
           S+ + YGS+TGTA++ A  L +E  +  ++  V + +E D+ +L
Sbjct: 2   SIAILYGSETGTAQDIAESLRREAQQRHLQARVHELDEYDVSQL 45


>AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical
           protein Y39G8B.9 protein.
          Length = 106

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 555 KDFGKEFSSVLWISDGYCGRIRWSTCQRRH 644
           KD G   + V W  +G+C   +W+  QR+H
Sbjct: 38  KDLGP--NCVNWARNGFCTNCQWTCAQRKH 65


>Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical
           protein F07C6.1 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 496 IFPEVFCPACFLFLNCKTTI*YLPTTMPTQLCQMC 392
           +F + FCP C+    C   + Y    M   L  +C
Sbjct: 277 VFGKAFCPECYRCRGCDKVLHYKDKVMELDLMPLC 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,199,203
Number of Sequences: 27780
Number of extensions: 346093
Number of successful extensions: 909
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)